From: In search of causal variants: refining disease association signals using cross-population contrasts
EA SAMPLE ONLY | AA SAMPLE ONLY | PRIMARY ANALYSIS OF THE COMBINED SAMPLE | ||||||
---|---|---|---|---|---|---|---|---|
SNP | p-value1 | Odds ratio (95% confidence interval) | p-value1 | Odds ratio (95% confidence interval) | Primary2 p-value | EA Population -specific odds ratio3 | AA Population -specific odds ratio3 | P-value, population-by -genotype term (heterogeneity) |
rs17483548 | ||||||||
rs17405217 | ||||||||
rs17483721 | ||||||||
rs2656052 | 0.0147 | 0.71 (0.539, 0.935) | 0.9737 | 1.004 (0.793, 1.272) | 0.04656 | 0.7074 | 1.0008 | 0.06031 |
rs7181486 | ||||||||
rs17483929 | ||||||||
rs17484235 | ||||||||
rs9788721 | 0.0031 | 0.662 (0.505, 0.870) | 0.4084 | 1.108 (0.868, 1.415) | 0.008229 | 0.6619 | 1.1045 | 0.005783 |
rs8034191 | 0.0052 | 0.679 (0.518, 0.891) | 0.7846 | 1.046 (0.756, 1.449) | 0.01903 | 0.6797 | 1.0389 | 0.04839 |
rs10519203 | 0.0035 | 0.667 (0.509, 0.875) | 0.8629 | 1.022 (0.795, 1.315) | 0.01312 | 0.6679 | 1.0208 | 0.02396 |
rs8031948 | ||||||||
rs931794 | ||||||||
rs2036527 | 0.0062 | 0.683 (0.520, 0.897) | 0.5081 | 0.906 (0.677, 1.213) | 0.01797 | 0.6837 | 0.9048 | 0.1676 |
rs17486278 | 0.0032 | 0.663 (0.504, 0.871) | 0.3669 | 0.884 (0.676, 1.155) | 0.007876 | 0.6616 | 0.8848 | 0.1356 |
rs7180002 | ||||||||
rs951266 | 0.0051 | 0.677 (0.515, 0.890) | 0.8252 | 0.952 (0.617, 1.469) | 0.01777 | 0.6761 | 0.9512 | 0.1894 |
rs16969968 | 0.0033 | 0.664 (0.505, 0.873) | 0.2397 | 0.729 (0.430, 1.235) | 0.006299 | 0.6636 | 0.7313 | 0.7479 |
rs1051730 | 0.0036 | 0.666 (0.507, 0.876) | 0.6663 | 0.913 (0.604, 1.380) | 0.01135 | 0.6636 | 0.9149 | 0.2016 |
rs1317286 | 0.0044 | 0.675 (0.515, 0.884) | 0.9011 | 0.982 (0.736, 1.311) | 0.01586 | 0.6745 | 0.9830 | 0.06096 |
rs12914385 | ||||||||
rs17487223 |