Variation at the Calpain 3 gene is associated with meat tenderness in zebu and composite breeds of cattle

BMC Genomic Data

Table 5 Means and standard errors of CAPN3 two-locus haplotypes and meat tenderness in different breeds

Locus	Breed	No copies¹			One copy²			Two copies³
		N⁴	x⁵kg	SE⁶	N	× kg	SE	N	× kg	SE
		No GT haplotypes			One GT haplotype			Two GT haplotypes
Int1⁷	BRM¹⁰	185	0.13	0.06	192	-0.04	0.06	28	-0.10	0.15
Int1	BEL¹¹	28	0.14	0.14	261	0.05	0.05	458	-0.02	0.03
Int1	SGT¹²	51	-0.06	0.08	282	-0.07	0.04	206	0.12	0.06
		No TG haplotypes			One TG haplotype			Two TG haplotypes
Int2⁸	BRM	176	0.13	0.07	184	-0.01	0.06	27	-0.23	0.15
Int2	BEL	22	0.23	0.17	212	0.03	0.05	379	-0.01	0.04
Int2	SGT	49	-0.10	0.07	227	-0.07	0.05	211	0.10	0.05
		No GG haplotypes			One GG haplotype			Two GG haplotypes
Int3⁹	BRM	61	-0.02	0.10	13	-0.29	0.24	276	0.09	0.05
Int3	BEL	24	0.10	0.13	16	0.09	0.15	467	-0.03	0.04
Int3	SGT	22	0.05	0.14	26	-0.08	0.12	354	0.05	0.04

¹No copies of the haplotype for the common allele, ² one copy of the haplotype for the common allele, ³ two copies of the haplotype of the common allele, ⁴ N sample size, ⁵ × average meat tenderness, ⁶ SE standard error, ⁷ Int1 haplotype between CAPN3:c.53T>G and CAPN3:c.1538+225G>T, ⁸ Int2 haplotype between CAPN3:c.1538+225G>T and CAPN3:c.2443-103G>C, ⁹ Int3 haplotype between CAPN3:c.53T>G and CAPN3:c.2443-103G>C, ¹⁰ BRM Brahman, ¹¹ BEL Belmont Red, ¹² SGT Santa Gertrudis

ISSN: 2730-6844