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Table 1 Primer sequences for the CAPN3 single nucleotide polymorphisms

From: Variation at the Calpain 3 gene is associated with meat tenderness in zebu and composite breeds of cattle

SNP

Name

5'-3' sequence

CAPN3:c.53T>G

  

MGB-probes

CAPN3E6100T

6FAM-TGAGCCCATGTCC

 

CAPN3E6100G

VIC-TGAGCCCAGGTCC

Primers

CAPN3E6G100TU1

ATGCCGACCGTCATTAGC

 

CAPN3E6G100TD1

GAGTAGATGCCACTTGGGTTTC

CAPN3:c.1538+225G>T

  

MGB-probes

CAPN3JK-V2-642G

VIC-TACACGCTCACATGC

 

CAPN3JK-V2-642T

6FAM-ACACTCTCACATGCT

Primers

CAPN3JKG642TU2

ATTGCATGGCCTCCTGAC

 

CAPN3JKG642TD2

CTCCAGAACACCTCTGGACTG

CAPN3:c.2443-103G>C

  

MGB-probes

CAPN3X3-266G

6FAM-CTTCCGTGTCTGGC

 

CAPN3X3-266C

VIC-TCTTCCCTGTCTGGC

Primers

CAPN3X3G266CU2

AGCCTCAGTTATGGCTTTATGC

 

CAPN3X3G266CD1

AGATCAGAATGCACAATGAGACA