From: Quality assessment of buccal versus blood genomic DNA using the Affymetrix 500 K GeneChip
Blood-Blood | Blood-Buccal (Replicate 1) | Blood-Buccal (Replicate 2) | |||||||
---|---|---|---|---|---|---|---|---|---|
Individual | N (%) SNPs * | Kappa | % Conc. | N (%) SNPs * | Kappa | % Conc. | N (%) SNPs * | Kappa | % Conc. |
A | 254,510 (97.0) | 0.98 | 99.0 | 248,352 (94.7) | 0.97 | 98.2 | 253,642 (96.7) | 0.98 | 98.7 |
B | 256,346 (97.7) | 0.99 | 99.6 | 256,100 (97.6) | 0.99 | 99.6 | 256,431 (97.7) | 0.99 | 99.5 |
C | 252,243 (96.2) | 0.98 | 98.8 | 257,629 (98.2) | 0.99 | 99.6 | 253,471 (96.6) | 0.97 | 98.3 |
D | 255,817 (97.5) | 0.99 | 99.4 | 250,054 (95.3) | 0.98 | 98.7 | 248,511 (94.7) | 0.96 | 97.3 |