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Table 1 Characterisation of 130 bovine microsatellites tested on a panel of 11 wild gaurs

From: Genomic conservation of cattle microsatellite loci in wild gaur (Bos gaurus) and current genetic status of this species in Vietnam

Marker Chromosome no. in cattle Allele size range (bp) Number of alleles H E H o PIC
AGLA17 1 217–221 3 0.385 0.273 0.326
AGLA293 5 231–231 1 - - -
BL1029 14 151–155 2 0.091 0.091 0.083
BL1038 6 109–109 1 - - -
BL1040 26 96–108 3 0.255 0.273 0.228
BL1043 7 100–104 3 0.177 0.182 0.163
BL1071 13 179–195 4 0.680 0.636 0.594
BL1095 15 164–174 3 0.385 0.455 0.326
BL25 28 171–185 2 0.247 0.273 0.208
BM1314* 26 - - - - -
BM1818 23 264–264 1 - - -
BM1824 1 187–187 1 - - -
BM1862 17 201–213 3 0.567 0.727 0.463
BM188 26 108–108 1 - - -
BM203 27 211–213 2 0.312 0.182 0.253
BM2113 2 129–129 1 - - -
BM2304* 8 - - - - -
BM3020 3 159–159 1 - - -
BM4005 25 107–107 1 - - -
BM4602 29 128–130 2 0.519 - 0.373
BM4621 6 131–131 1 - - -
BM6017* X - - - - -
BM6425 14 167–195 6 0.823 0.818 0.751
BM6438 1 256–256 1 - - -
BM6465 3 122–122 1 - - -
BM8139 1 110–116 3 0.394 0.273 0.344
BM8151 18 157–161 3 0.589 0.545 0.476
BM861 Y 135–135 1 - - -
BM875 10 107–119 2 0.519 0.364 0.373
BMC1410 4 215–219 3 0.593 0.636 0.504
BMC2228* 29 - - - - -
BMC6020 28 177–177 1 - - -
BMC6021 X 141–141 1 - - -
BMS1074 4 157–157 1 - - -
BMS1120 20 123–137 6 0.835 0.909 0.767
BMS1128 20 80–82 2 0.091 0.091 0.083
BMS1244 29 103–105 2 0.173 0.182 0.152
BMS1247 7 111–121 3 0.537 0.364 0.444
BMS1282 20 151–165 4 0.333 0.273 0.302
BMS1322 18 117–121 3 0.498 0.091 0.419
BMS1353 25 95–103 2 0.368 0.091 0.290
BMS1355 18 154–160 4 0.697 0.818 0.607
BMS1616 X 65–65 1 - - -
BMS1714 28 120–122 2 0.416 0.545 0.318
BMS1825 17 191–191 1 - - -
BMS1857 29 155–165 4 0.675 0.545 0.575
BMS1926 24 132–136 3 0.394 0.091 0.344
BMS1928 1 141–161 4 0.576 0.636 0.511
BMS1948 29 93–93 1 - - -
BMS1979 7 95–99 3 0.498 0.636 0.419
BMS2213 18 112–120 2 0.524 0.455 0.375
BMS2252 12 158–164 4 0.697 0.455 0.604
BMS2270 24 57–63 2 0.485 0.545 0.356
BMS2526 24 135–159 4 0.762 0.636 0.678
BMS2639 18 160–160 1 - - -
BMS3024 24 142–142 1 - - -
BMS332* 26 - - - - -
BMS4015 1 144–152 4 0.688 0.636 0.606
BMS424B 11 256–258 2 0.091 0.091 0.083
BMS522 7 134–134 1 - - -
BMS574 1 131–131 1 - - -
BMS631 X 146–146 1 - - -
BMS650 19 141–141 1 - - -
BMS672 22 143–143 1 - - -
BMS711 1 102–102 1 - - -
BMS745 19 109–109 1 - - -
BMS779 4 191–195 2 0.312 0.364 0.253
BMS911* X - - - - -
BR4206 18 110–110 1 - - -
BR4406 18 114–114 1 - - -
CSRM60 10 86–114 2 0.368 0.273 0.290
CSSM023* 24 - - - - -
CSSM66 14 182–202 3 0.593 0.727 0.504
ETH10 5 207–213 3 0.450 0.455 0.385
ETH11 16 204–212 4 0.688 0.636 0.593
ETH121 2 182–210 3 0.498 0.455 0.419
ETH123* X - - - - -
ETH152 5 198–198 1 - - -
ETH185 17 219–219 1 - - -
ETH225 9 145–159 3 0.636 0.636 0.524
ETH3 19 127–131 3 0.654 0.545 0.553
HAUT14* 18 - - - - -
HAUT24 22 120–120 1 - - -
HAUT27 26 145–145 1 - - -
HEL1 15 108–120 3 0.628 0.636 0.519
HEL11* 26 - - - - -
HEL13 11 193–203 3 0.325 0.364 0.282
HEL5* 21 - - - - -
HEL9 8 146–152 4 0.610 0.545 0.533
IDVGA59 26 250–254 3 0.437 0.364 0.360
IDVGA90 7 194–194 1 - - -
ILSTS005* 10 - - - - -
ILSTS006 7 275–281 2 0.173   0.152
ILSTS015 29 265–265 1 - - -
ILSTS017 X 117–117 1 - - -
ILSTS021 18 116–116 1 - - -
ILSTS102 25 146–146 1 - - -
INRA005 12 135–141 4 0.697 0.818 0.600
INRA023 3 207–217 4 0.710 0.636 0.623
INRA032 11 169–181 5 0.753 0.727 0.674
INRA035 16 108–108 1 - - -
INRA037 10 126–132 4 0.727 0.636 0.637
INRA063 18 173–187 5 0.758 0.636 0.675
INRA081 26 145–153 3 0.567 0.545 0.463
INRA117 1 91–97 2 0.173 0.182 0.152
INRA121 18 114–136 4 0.710 0.545 0.615
INRA124 Y 132–132 1 - - -
INRA126 Y 182–182 1 - - -
INRA133 6 221–231 3 0.437 0.364 0.360
INRA183 27 117–117 1 - - -
INRA189* Y - - - - -
MB054 18 123–123 1 - - -
MB085 15 198–202 3 0.593 0.455 0.505
MHCII 23 213–225 4 0.723 0.636 0.633
MM12E6 9 108–108 1 - - -
RM026 26 81–81 1 - - -
RM372 8 128–134 3 0.450 0.364 0.385
SPS115 15 253–253 1 - - -
TEXAN10 18 145–151 4 0.706 0.818 0.613
TGLA122 21 166–168 2 0.455 0.455 0.340
TGLA126 20 121–125 3 0.498 0.091 0.419
TGLA179 27 89–103 3 0.697 0.636 0.591
TGLA227 18 72–84 3 0.584 0.455 0.490
TGLA23 13 100–104 3 0.567 0.818 0.436
TGLA49 1 115–117 2 0.247 0.273 0.208
TGLA53 16 151–175 5 0.701 0.727 0.606
TGLA73 9 116–126 4 0.749 0.727 0.663
UWCA25 13 102–102 1 - - -
XBM11 X 182–182 1 - - -
XBM7 X 174–174 1 - - -
  1. * = markers not amplified
  2. H E = expected heterozygosity
  3. H o = observed heterozygosity
  4. PIC = polymorphism Information Content
  5. The 28 microsatellites with PIC value > 0.5 are bold-faced. Information concerning the bovine microsatellite markers used can be acquired from internet sites [32-34].
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