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Table 2 Descriptives and results of genetic association on LETS

From: Generalizing Terwilliger's likelihood approach: a new score statistic to test for genetic association

haplotype

case chromosomes (%)

control chromosomes (%)

X 2

S ^ 1 m MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaacuWGtbWugaqcamaaBaaaleaadaWcaaqaaiabigdaXaqaaiabd2gaTbaaaeqaaaaa@307A@

TLR

λ ^ MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaaiiGacuWF7oaBgaqcaaaa@2E77@

FGG (n1 = 938, n2 = 942)

0.005

0.515

0.003

0.09

H1 + H4

374 (39.8)

399 (42.4)

    

H2

311 (33.7)

254 (26.9)

    

H3

249 (26.5)

289 (30.7)

    

FGA (n1 = 936, n2 = 942)

0.034

0.003

0.012

0.07

H1

270 (28.7)

266 (28.2)

    

H2

326 (34.5)

270 (28.7)

    

H3

95 (10.1)

117 (12.4)

    

H4

100 (10.6)

121 (12.8)

    

H5

151 (16.1)

168 (17.8)

    

FGB (n1 = 936, n2 = 932)

0.090

0.049

0.072

0.05

H1

329 (34.9)

316 (33.6)

    

H2

232 (24.6)

190 (20.2)

    

H4+H5

148 (15.7)

166 (17.7)

    

H6

128 (13.6)

143 (15.2)

    

H3+H7

105 (11.1)

125 (13.3)

    
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BMC Genomic Data

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