# | Gene symbol | NCBI rs number | DNA variant | PCR primer "Forward" 5'-3' | PCR primer "Reverse" 5'-3' | Mean melting, °C | Δ mean melting, °C | Fragment length, bp |
---|---|---|---|---|---|---|---|---|
1 | BRCA1 | rs799923 | T59C | *gtccatggtgtcaagtttct | gttggacactgagactggtt | 70.7 | 0.6 | 147 |
2 | BRCA1 | rs16940 | T42C | *accccaaagatctcatgtta | cgagatactttcctgagtgc | 68.9 | 0.4 | 154 |
3 | MTHFR | rs1801133 | T28C | *catccctattggcaggtt | aagaaaagctgcgtgatg | 75.3 | 0.3 | 159 |
4 | OPSIN | ac092402 | T51G | *tctgtctttgctgcttcac | tttagaaaatgcctttggtc | 70.6 | 0.1 | 159 |
5 | MTHFR | rs1801131 | A41C | *actccagcatcactcact | gagctgctgaagatgtgg | 73.5 | 0.5 | 157 |
6 | MTHFR | rs2274976 | A35G | *ccaggttgaccaggaagt | gtgtaggacgaggccttt | 75.7 | 0.3 | 156 |
7 | CBS | rs234706 | A45G | *ggtgactgaggtgtcagg | gacgcaccatcacactg | 77.6 | 0.5 | 168 |
8 | NQO1 | rs1800566 | T25C | *ctcatcccaaatattctcca | tctgtggcttccaagtctta | 72.6 | 0.2 | 157 |
9 | DPYD | rs3918290 | A53G | *caccaacttatgccaattct | tgcatattggtgtcaaagtg | 68.3 | 0.6 | 138 |
10 | DPYD | rs17376848 | T43C | *caccaacttatgccaattct | tgcatattggtgtcaaagtg | 69.0 | 0.3 | 138 |
11 | DPYD | rs1801265 | T30C | *tcaggatttcttttccaatg | atcctcgaacacaaactcat | 70.5 | 0.7 | 120 |
12 | CTLA-4 | rs5742909 | T40C | *tcgaaaagacaacctcaag | aggaaattctccaagtctcc | 67.8 | 0.3 | 175 |
13 | COL1A1 | rs1007086 | A64G | *ctaaggatgggaggcacga | ccccctgtaagtatcactcc | 76.5 | 0.2 | 132 |
14 | COL1A1 | rs1061237 | T30C | *ttcctgtaaactccctccat | tgaaattgtctcccattttt | 73.7 | 0.2 | 164 |
15 | COL1A1 | rs2857401 | T54G | *ctgagatggcagttcttga | ctaaatgtctgttccctcca | 74.1 | 0.2 | 155 |
16 | COL1A1 | rs2249492 | T68C | *catagtgccctctctccat | gaggtcttggtggttttgta | 76.0 | 0.4 | 161 |
17 | COL1A1 | rs2277632 | A49G | *ctctccctccctcctactc | aatccagtactctcctgtgg | 76.6 | 0.2 | 166 |
18 | COL1A1 | rs2075558 | A48G | *catttttcatcaccgactg | agtaatggaggcaggaagat | 75.8 | 0.2 | 168 |
19 | COL2A1 | rs2070739 | A46G | *cagtgtacgtgaacctgcta | acctaccactgcaagaacag | 76.5 | 0.3 | 168 |
20 | COL2A1 | rs2276454 | T33C | *tccaggtcttcagggaat | tgagaggctgtaacctcagt | 76.7 | 0.6 | 131 |
21 | COL2A1 | rs2276455 | T61C | *ggtgagatgaaggaacagg | ctggtgatgaaggtttctgt | 71.2 | 0.3 | 143 |
22 | COL2A1 | rs1635550 | T57C | *agaagtacctttgcccaatc | caggaagaccctagacagaa | 71.8 | 0.6 | 131 |
23 | COL2A1 | rs1635537 | T94C | *agaaacttgctttgccttct | ctccttccctcctctgtact | 72.5 | 0.3 | 166 |
24 | COL2A1 | rs1793958 | T25C | *gatcttgagctcttcattgc | catgaggatatggaggtgac | 71.9 | 0.3 | 142 |
25 | COL11A1 | rs2229783 | T87C | *gtctgagtacccattggaaa | caagcagatgcagatgataa | 67.3 | 0.3 | 157 |
26 | COL11A1 | rs3753841 | T63C | *attctagggtcctgttggtt | aattggaaacattcactcca | 70.2 | 0.2 | 151 |
27 | COL11A1 | rs2615987 | T55G | *tgaatatgcacccttttctt | tgaacaccagaatttgaaca | 66.6 | 0.4 | 155 |