From: Empirical vs Bayesian approach for estimating haplotypes from genotypes of unrelated individuals
Performances | Empirical Method | Bayesian Method | ||
---|---|---|---|---|
 | PL-EM | HPlus | PHASE | HAPLOTYPER* |
Similarity Index | Â | Â | Â | Â |
Mean | 0.988 | 0.988 | 0.987 | 0.998 |
Median | 1.0 | 1.0 | 1.0 | 1.0 |
Standard deviation | 0.025 | 0.024 | 0.027 | 0.025 |
Range | (0.833, 1.0) | (0.833, 1.0) | (0.689,1.0) | (0.833,1.0) |
Prediction Rate | Â | Â | Â | Â |
Mean | 0.987 | 0.987 | 0.987 | 0.987 |
Median | 1.0 | 1.0 | 1.0 | 1.0 |
Standard deviation | 0.027 | 0.027 | 0.030 | 0.027 |
Range | (0.800, 1.0) | (0.800, 1.0) | (0.683, 1.0) | (0.800, 1.0) |
Running Time (in second) | 15 | 7 | 1174 | 37 |