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Table 2 Microsatellite loci diversity in the developed database.

From: Analysis of molecular diversity, population structure and linkage disequilibrium in a worldwide survey of cultivated barley germplasm (Hordeum vulgare L.)

Locus

Chromosome

Allelic richness (AR)

Gene diversity (GD)

Number of unique (rare) alleles

Heterogeneity, (%)

  

per locus

per chromosome

 

per locus

per chromosome

 

Bmac0032

1H

33

110

0.86

4 (4)

39

1.7

HVM0020

 

12

 

0.73

4 (2)

 

1.2

Bmag0211

 

13

 

0.8

2 (1)

 

1.5

Bmag0382

 

14

 

0.64

5 (3)

 

1.5

Bmag0718

 

13

 

0.79

3 (1)

 

0.5

GBMS0184

 

13

 

0.77

2 (1)

 

2.7

Bmag0579

 

12

 

0.59

2 (5)

 

0.5

GBMS0247

2H

18

106

0.83

3 (2)

33

2.2

HVM0036

 

19

 

0.8

6 (3)

 

1.9

Bmag0518

 

21

 

0.8

3 (4)

 

1.7

GBMS0229

 

12

 

0.6

2 (5)

 

2.0

GBMS0160

 

15

 

0.75

2 (1)

 

1.3

HVM0054

 

12

 

0.78

1(0)

 

2.0

Bmag0749

 

9

 

0.74

1(0)

 

0.7

EBmac0705

3H

20

167

0.58

5 (3)

70

5.2

Bmag0603

 

25

 

0.85

7 (5)

 

1.5

GBMS0046

 

30

 

0.82

8 (8)

 

2.0

HVM0060

 

18

 

0.79

3 (5)

 

1.4

Bmag0225

 

22

 

0.91

2 (4)

 

1.8

GBMS0189

 

27

 

0.81

6 (5)

 

2.5

Bmag0013

 

25

 

0.82

4 (5)

 

1.3

HVM0040

4H

14

103

0.71

3 (3)

28

1.9

EBmac0906

 

11

 

0.77

4 (1)

 

1.5

GBMS0087

 

17

 

0.47

5 (1)

 

2

EBmac0701

 

17

 

0.84

1 (1)

 

2.4

GBMS0133

 

13

 

0.69

2 (2)

 

1.5

EBmac0788

 

20

 

0.84

1 (3)

 

1.6

HVM0067

 

11

 

0.73

0(1)

 

2.3

GBMS0032

5H

14

90

0.66

1 (1)

24

2

EBmac0684

 

10

 

0.73

1 (2)

 

0.6

GMS0061

 

7

 

0.71

0(1)

 

1.4

GMS0027

 

32

 

0.8

6 (7)

 

3.9

GBMS0119

 

14

 

0.74

0(1)

 

3.3

GMS0001

 

13

 

0.59

3 (1)

 

2.6

Bmac0316

6H

26

127

0.74

0 (11)

28

2

GBMS0083

 

14

 

0.84

1 (1)

 

2.1

GBMS0125

 

6

 

0.54

1 (2)

 

0.7

HVM0065

 

5

 

0.59

0 (0)

 

0.4

EBmac0602

 

21

 

0.73

1 (3)

 

2.3

Bmag0613

 

27

 

0.91

2 (2)

 

2.1

Bmac0040

 

28

 

0.92

2 (2)

 

2.5

GBMS0192

7H

12

96

0.71

1 (3)

33

10.4

GBMS0035

 

6

 

0.69

0 (0)

 

2.4

GBMS0111

 

15

 

0.38

2 (7)

 

0.5

Bmag0507

 

18

 

0.85

1 (2)

 

2.6

EBmac0755

 

20

 

0.74

5 (4)

 

6.6

GBMS0183

 

10

 

0.69

2 (2)

 

1.2

Bmag0135

 

15

 

0.78

1 (3)

 

0.8

In total

 

799

  

121 (134)

 

0.8

Average

 

16.7

 

0.74

2.6 (2.9)

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