From: Allele frequency misspecification: effect on power and Type I error of model-dependent linkage analysis of quantitative traits under random ascertainment
True allele frequencies
0.001, 0.24975
0.01, 0.2475
0.05, 0.2375
0.1, 0.225
0.2, 0.2
0.3, 0.175
0.5, 0.125
Assumed allele frequencies
0.4, 0.15
0.6, 0.1