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Figure 2 | BMC Genetics

Figure 2

From: Selection of SNP subsets for association studies in candidate genes: comparison of the power of different strategies to detect single disease susceptibility locus effects

Figure 2

Estimation of the LD for all the pairs of SNPs within TNF. The LD was measured by the squared standardized coefficient r2 [10]. The LD values were calculated by first estimating the frequencies of the haplotypes obtained from all the SNPs. These frequencies have then been added to infer the haplotype frequency, and further the LD value, of each pair of SNPs. All the values were color-coded with the GOLD program [11].

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BMC Genomic Data

ISSN: 2730-6844

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