Table 4 Mean of LD summaries. We show results for the mean value of summaries of LD behavior for ms and the SMC and SMC' algorithms. We simulated a 2 Mb region for a sample of size 500. Numbers shown are averaged over 1000 replicates. Markers with MAF less than 0.05 were excluded.
Statistic | ms | SMC | SMC' |
|---|---|---|---|
H | 404 | 404 | 404 |
R M | 236 | 232 | 236 |
% seq. in hap. blocks | 41.1 | 41.2 | 41.2 |