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Table 1 Comparisons of information content and NPL scores between 11,120 SNPs (All) and 7,328 SNPs (Subset) in genome-wide scans, regions with maximum NPL scores 1.5 were reported.

From: A comparison in association and linkage genome-wide scans for alcoholism susceptibility genes using single-nucleotide polymorphisms

  Average information content Peak NPL score Position (cM)
Chr All Subset All Subset All Subset
1 0.91 0.91 1.81 a 1.75 77.15 77.15
    1.79 1.54 107.16 107.16
    1.56   126.23  
    2.04 1.95 142.09 142.09
    2.13   237.83  
    1.75 1.92 274.27 274.27
2 0.93 0.92 2.72   5.74  
    2.44 2.33 18.03 18.03
    3.81   90.58  
     3.72   90.60
    2.96 2.99 112.07 112.07
     1.98   135.497
    2.31   136.45  
    2.74 2.59 244.44 244.44
3 0.93 0.91   1.70   60.44
    1.80   60.44  
    1.84   86.23  
     2.10   111.82
    1.88 2.13 143.25 144.53
4 0.92 0.92 2.86 2.59 204.47 204.47
5 0.92 0.92 1.52   109.78  
6 0.89 0.89 2.06   21.02  
    1.92 2.03 116.07 116.07
    2.03 1.74 185.42 185.42
7 0.91 0.92 1.98 1.74 13.65 13.65
     2.72   31.68
    2.86   31.84  
    2.23   54.06  
     1.96   54.08
    2.90 2.81 101.05 101.05
    1.98 2.04 123.79 123.79
    2.08   128.61  
8 0.92 0.92 2.29 2.24 21.97 21.97
    2.10   41.70  
     2.14   42.16
9 0.92 0.91 2.24 2.13 141.17 141.17
10 0.91 0.90   1.57   47.31
    1.71   48.75  
    2.74 2.85 106.69 106.69
    2.03 1.87 128.63 128.63
    3.76 3.08 171.41 171.41
11 0.91 0.92   2.44   125.15
    2.94   125.27  
12 0.92 0.91 1.58   4.76  
    1.53   51.77  
    1.88   71.83  
    2.06 2.08 86.43 86.43
    1.71   107.48  
     1.64   122.16
    1.60   122.20  
    1.85   169.44  
13 0.83 0.92 1.87   0.0000  
    2.56 2.26 86.87 86.87
14 0.92 0.91 1.81 1.66 23.73 23.73
    1.71 1.66 88.50 88.50
15 0.91 0.91 1.62   29.81  
16 0.90 0.89     
17 0.90 0.89     
18 0.92 0.91   2.19   106.82
    2.35   108.45  
19 0.88 0.87     
20 0.90 0.90   1.74   5.81
21 0.92 0.91     
22 0.87 0.87 1.61 1.57 28.51 28.50
23 0.91 0.91 3.21 3.21 42.78 42.78
Overall average SD 0.91 (1.18) 0.91 (0.094)     
  1. aGray text indicates local maximums in the region, while black text indicates the global maximum.