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Table 1 Optimal subsets of locus D2 as identified by the two measures.

From: Strategies for selecting subsets of single-nucleotide polymorphisms to genotype in association studies

No. of SNPs

Standardized entropy

Chapman's R2

 

Optimal subset

Rating

Optimal subset

Rating

1

1 a

      

0.1932

6

      

0.189

2

1

5

     

0.3848

4

6

     

0.2553

3

1

4

5

    

0.5718

1

4

6

    

0.3452

4

1

2

4

5

   

0.7195

1

2

4

6

   

0.4335

5

1

2

3

4

5

  

0.8353

1

2

3

4

6

  

0.5794

6

1

2

3

4

5

7

 

0.9493

1

2

3

4

5

7

 

0.7399

7

1

2

3

4

5

6

7

1

1

2

3

4

5

6

7

1

  1. aSNPs highlighted in red differ between the two uniquely optimal subsets of equal size.