Figure 2

Separately simulated data modelled on Danacaa replicate 2, D01S023–D01S024. Estimated posterior means and 95% confidence intervals for the effects of individual haplotypes for both CAR (16 individual haplotype effects) and Potts models (correctly estimated two clusters represented by the orange area for the haplotypes 11, 12, 21, and 22, and by the blue area for the rest). The true simulated values of δ = (-2, 0) are shown by solid red and blue lines respectively.