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Table 3 Linkage results of multipoint analysis using sex-specific genetic mapsa

From: A genome scan for parent-of-origin linkage effects in alcoholism

    

LOD score (p-value)

 

Marker data

Chr

Location (cM)

Closet marker

Both

Maternal

Paternal

Parental effect p-value

Microsatellite

12

153.7

D12S2078

0.49 (0.07)

1.56 (0.003)

0.10 (0.7)

0.02

Illumina

7

1.2

rs1362136

0.87 (0.02)

0.54 (0.06)

1.52 (0.004)

0.02

 

9

59.0

rs954779

0.07 (0.3)

1.66 (0.003)

0.30 (0.9)

0.003

Affymetrix

10

57.0

rs927099

0.64 (0.04)

1.55 (0.004)

0.04 (0.3)

0.04

 

12

161.6

rs1465727

0.91 (0.02)

1.79 (0.002)

0.09 (0.7)

0.03

 

13

93.1

rs1415055

0.62 (0.04)

0.0002 (0.5)

1.61 (0.003)

0.03

 

7

13.7

tsc1462560

1.26 (0.008)

0.85 (0.02)

1.76 (0.002)

0.01

 

10

62.5

tsc0608195

0.92 (0.02)

1.87 (0.002)

0.009 (0.4)

0.04

 

12

154.4

tsc0553175

0.71 (0.03)

2.16 (0.0007)

0.04 (0.6)

0.009

  1. aThe markers which have a LOD score ≥ 1.5 and a parental effect p ≤ 0.05 are listed. The highest LOD score at each location is in bold.
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BMC Genomic Data

ISSN: 2730-6844

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