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Table 2 Frequency distribution for discrepancies in 94 SNPs genotyped in both Illumina and Affymetrix linkage panels.

From: An analysis of identical single-nucleotide polymorphisms genotyped by two different platforms

Number of Discrepancies

Frequency

Familiala

Uniqueb

0

58

-

-

1

14

-

-

2

6

2 (2)

8

3

5

1 (3)

12

4

2

1(2),1(4)

2

5

1

 

5

6

1

1(2)

4

9

2

2(2),1(3)

11

12

1

2(2),2(4)

0

16

1

5(2)

6

17

1

1(2),1(3)

12

21

1

2(2),1(4),1(5),1(6)

2

36

1

4(2),4(3),2(4)

8

  1. aThe number of different families and the number of persons in the family (in parentheses) that show the discrepancy.
  2. bThe number of families with just one discrepancy.
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