Extension of multifactor dimensionality reduction for identifying multilocus effects in the GAW14 simulated data

Table 3 Analysis of data II

		p-Value of chi square			p-Value of prediction error
Marker	χ ²	Fixed permutation	Non-fixed permutation	Prediction error of test data	Fixed permutation	Non-fixed permutation	Omnibus permutation
10-fold cross-validation
(6)	1.446	0.136	0.572	0.462	0.018 ^a	0.13	0.184
(6 7)	3.101	0.002	0.046	0.462	0	0.01	0.184
(2 3 8)	2.284	0.027	0.094	0.432	0	0.008	0.043
Non-cross-validation
(6)	6.630	0.03	0.186	0.458	0.017	0.138
(6 7)	20.985	0	0.006	0.430	0	0.019
(2 3 8)	39.324	0	0.005	0.394	0	0.003

^a Bold text indicate that p-values of the statistics are significant at alpha = 0.05.