Table 3 Two-point regression (stage 1) and trait association (QPDT-stage 2) results for chromosome 4
Marker | Source | MAF | Mbp | cM | Method | LOD | χ2 | p-value |
|---|---|---|---|---|---|---|---|---|
tsc0592063 | Affy | 0.45 | 13.984 | 27.3 | QPDT | -a | 11.38 | 0.001 |
rs936232 | Illum | 0.42 | 25.564 | 37.1 | REG | 1.94 | - | - |
rs1031739 | Illum | 0.40 | 87.688 | 93.1 | QPDT | - | 6.99 | 0.008 |
rs2046015 | Illum | 0.43 | 94.144 | 98.1 | QPDT | - | 7.47 | 0.006 |
rs0965823 | Affy | 0.49 | 96.436 | 102.3 | QPDT | - | 4.35 | 0.037 |
rs1378876 | Illum | 0.37 | 97.354 | 100.4 | REG | 2.14 | - | - |
rs960345 | Illum | 0.46 | 105.689 | 105.6 | QPDT | - | 8.50 | 0.004 |
rs0724156 | Affy | 0.24 | 131.384 | 128.1 | QPDT | - | 8.62 | 0.003 |
rs1365372 | Illum | 0.12 | 139.914 | 129.8 | REG | 1.91 | - | - |