Table 1 Conditional probabilities* of observed genotypes, given the true genotype of pool j. For k = 2 individuals with SNP locus AB in pool j.
From: Estimating haplotype frequencies in pooled DNA samples when there is genotyping error
| Â | Observed Unordered Genotypes/Number of A Alleles in Pool j | True Unordered Genotype AABB | ||||
|---|---|---|---|---|---|
α | BBBB/ 0 | ABBB/ 1 | AABB/ 2 | AAAB/ 3 | AAAA/ 4 |
1 | 0.063 | 0.250 | 0.375 | 0.250 | 0.063 |
5 | 0.0002 | 0.131 | 0.737 | 0.131 | 0.0002 |
25 | 0.000 | 0.006 | 0.988 | 0.006 | 0.000 |
125 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 |