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Figure 3 | BMC Genetics

Figure 3

From: Estimating haplotype frequencies in pooled DNA samples when there is genotyping error

Figure 3

Effect of LD on accuracy of haplotype frequency estimation for different levels of genotyping error. Accuracy of estimation procedure measured by the similarity index as a function of the LD values for k = 1, 2, 5, and 10 individuals. LD ranges from 0.00–0.25. The black line and circles represent no genotyping error, the blue line and circles represent intermediate genotyping error, and the red line and circles represent maximum level of genotyping error. Smooth line fitted using the Lowess function in Splus.

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