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Table 5 Cladistic analysis of Crohn's data 1000 equiparsimonious trees are studied. SNPs are ranked from the least to the most significant. In bold, the presumed susceptibility sites previously identified by Hugot et al. [30].

From: On the use of haplotype phylogeny to detect disease susceptibility loci

 

least significant

-------->

most significant

mfHa

SNP 5

SNP 9

SNP 6

SNP 7

 

SNP 13

SNP 12

SNP8

consHb

SNP 9

SNP 5

SNP 6

SNP 7

 

SNP 13

SNP 12

SNP8

  1. a Rooting on the most frequent haplotype
  2. b Rooting on a consensus sequence