Table 3 Primer used for genotyping
SNP | left primer | right primer | extension primer | stop mix |
|---|---|---|---|---|
hCV2880804 | ACGTTGGATG-CTGGGATACTTCTGAGAGTG | ACGTTGGATG-TTTTCCCTGGAAAGTTTGGG | CCATTGTCCTGGTATAACCA | ACG |
rs2228570 | ACGTTGGATG-TCAAAGTCTCCAGGGTCAGG | ACGTTGGATG-AGACCTCACAGAAGAGCACC | CCCTGCTCCTTCAGGGA | ACG |
rs3819545 | ACGTTGGATG-AATGGTGGTTACTGCAGCTC | ACGTTGGATG-GAAACCAGTCCTCTGTCATG | TAGGTTCGGTCTTTGGCT | ACG |
rs3782905 | ACGTTGGATG-GGGTCTCAAATTCTTAATGAG | ACGTTGGATG-AAACTAGCAGAAAGAGGCAG | GTGGGAGGGAGTGCTGA | ACT |
rs2853564 | ACGTTGGATG-CTGCATTGCTCCTGACTTAG | ACGTTGGATG-AGGTAGCTTAGCTCTGAGTC | TTTCTGCAACCCTAAGCC | ACT |
rs731236 | ACGTTGGATG-TGTGCCTTCTTCTCTATCCC | ACGTTGGATG-TGTACGTCTGCAGTGTGTTG | CGGTCCTGGATGGCCTC | ACT |
rs1544410 | ACGTTGGATG-TAGATAAGCAGGGTTCCTGG | ACGTTGGATG-AATGTTGAGCCCAGTTCACG | AGCCTGAGTATTGGGAATG | ACG |
rs2239185 | ACGTTGGATG-CAATTCCAGTCACATCTCGG | ACGTTGGATG-CCTGTGTGACATTTACACCC | CCCTCCTCTGTCTTCAC | ACT |
rs987849 | ACGTTGGATG-GAATAGTGCCTTATAGATAG | ACGTTGGATG-AGCTAGAAGTTCTGGTGATC | GAAATATTCGTAATGCTGGAT | ACT |
rs1540339 | ACGTTGGATG-TCACACACATTCTCAGTGGG | ACGTTGGATG-TTTGCAGAGGCTGTCTTCTC | GTTGGTGCCCACCCTAA | ACG |
rs2239186 | ACGTTGGATG-GTCCACAGTGACTATAGACC | ACGTTGGATG-AAGAAGGAGAAGCAGGCATC | CAGGGGTGGAAGAAGAGGAG | ACT |
rs1989969 | ACGTTGGATG-TGTATGCAGAGCTTAGCAGG | ACGTTGGATG-TTTCAGAGGTCAGAGGTGAC | GTCAGAGGTGACATCCAG | ACT |
rs2853564 | ACGTTGGATG-CTGCATTGCTCCTGACTTAG | ACGTTGGATG-AGGTAGCTTAGCTCTGAGTC | TTTCTGCAACCCTAAGCC | ACT |