Searching QTL by gene expression: analysis of diabesity

BMC Genomic Data

Table 1 Genes selected for expression analysis by ExQuest.

Chr	QTL¹	Genes picked via ExQuest	Total Genes in Region	Interval Range (Mb)
1	Obq2	Gsta3	73	13.7
	Obq7, Wt6q1, Insq2, Insq6	Aox1, Fn1, Pecr, Igfbp2, Plcd4, Scg2, IRS-1, Inpp5d	401	44.1
	Nidd6	Qscn6	85	9.4
	Obq9	Fmo1, Fmo3, Apoa2	117	11.7
	Wt6q2	Hsd11b1	63	7.3
4	Bwq1	Decr1	64	12.1
	Triglq1, Bglq4	Ttpa, Bhmt, Baat, Aldo2	40	9.8
	Nidd1, Dob1	Lepr, Dio1, Scp2, Faah, Usp1	350	32.4
	Tafat	Ela3b, Ela2, Dvl1	319	18.0
10	Insq9, Igfbp3q2	Ass1, Ftcd, Col18a1, Itgb2, Agpat3, Ndufs7, Oaz1, Pah, Igf-1, Nr1h4, Kitl	605	55.1
	Bgeq8	Rdh7, Hsd17b9	257	19.8
17	Obq4, Wta4	Plg, Acat2, Actl, Hagh, Igfals, Decr2, Clps, Tff1, Tff2, Tff3, Apom	554	27.2
	Hdl4	Gnmt, Lrg, Sepr	161	10.7
	Insq5	Abcg5	69	10.0
19	Iba4	Aldh1a1, Aldh1a7, Vldlr, Plce1	190	23.3
	Afw8	Pi4k2a, Cpn1, Elovl3	159	8.8
	Nobq2, Bglq13	Ins1, Gpam, Facl5	39	8.4
	Tanidd1, T2dm2	Gfra1, Pnlip, Pnliprp1, Pnliprp2	40	3.6
X	Bw1	Rgn	149	51.5
	Bw3	Rab9	278	30.0

¹QTL name, abbreviation: Obesity, Obq; Body weight, 6 weeks, Wt6q; Insulin, Insq; Non-insulin-dependent diabetes mellitus, Nidd; Body weight, Bwq; Triglyceride, Triglq; Body growth late, Blgq; Dietary obesity, Dob; Tally ho associated mesenteric fat pad weight, Tafat; Insulin-like growth factor binding protein 3, Igfbp3q; Body growth early, Bgeq; Weight adult, Wta; High density lipoprotein level, Hdl; Induction of brown adipocytes, Iba; Abdominal fat weight, Afw; New Zealand obese, Nobq; Tally ho associated non-insulin dependent diabetes mellitus, Tannid; Type 2 diabetes mellitus, T2dm; Body weight, Bw.

ISSN: 2730-6844