SNPa | Geneb | Namec | dbSNP Accession | Mutationd | Domain | Minor allele frequency | Forward primer | Reverse primer |
---|---|---|---|---|---|---|---|---|
1 | APOE | Â | ss12568587 | G-C | 5' UTR | 0.357 | TCCCCAGGAGCCGGTGA | CCCCAAGCCCGACCCC |
2 | APOE | Â | ss12568609 | G-A | Intron 2 | 0.399 | CCTCAGGTGATCTGCCCGTTTC | ACTCCTGGGCTCAAGTGATCCTC |
3 | APOE | Â | ss12568607 | T-C | Exon 4 | 0.149 | CGGGCACGGCTGTCCAA | CGAGCATGGCCTGCACCTC |
4 | APOE | Â | ss12568612 | C-T | Exon 4 | 0.087 | GCTGCGTAAGCGGCTCC | GCGGCCCTGTTCCACC |
5 | COL1α1 |  | ss12568606 | G-T | 5' UTR | 0.154 | GCACCCTGCCCTAGACCAC | CCTAGTGCCAGCGACTGCA |
6 | COL1α1 | Sp1 | ss12568597 | G-T | Intron 1 | 0.188 | CCAATCAGCCGCTCCCATTC | CATCGGGAGGGCAGGCTC |
7 | COL1α1 |  | ss12568598 | G-T | Exon 8 | 0.000 | GGAAGACTGGGATGAGGGCA | GGCTCGCCAGGCTCACC |
8 | COL1α1 |  | ss12568584 | G-A | Exon 45 | 0.019 | CTCAGCCTTCCCTGGCCAA | AGGCGGAAGTTCCATTGGCATC |
9 | ER-α |  | ss12568579 | A-G | Exon 1 | 0.484 | TTGAGCTGCGGACGGTTCA | CGCCGGTTTCTGAGCCTTC |
10 | ER-α | Pvu II | ss12568596 | T-C | Intron 1 | 0.449 | TGGGATTCCAGGCATGAACCAC | TGGCGTCGATTATCTGAATTTGGCC |
11 | ER-α |  | ss12568619 | G-A | Intron 3 | 0.257 | CCCAGAAACAAGTCATCTGCTATTGACA | TGTAACAAAAGGTTAACAATGGTTAGCCC |
12 | ER-α |  | ss12568618 | G-C | Exon 4 | 0.218 | ACAGCCTGGCCTTGTCCC | CAGGTTGGTCAGTAAGCCCATCA |
13 | ER-α |  | ss12568585 | G-A | Intron 4 | 0.098 | GATCAATGAAGTGGGTCTTGAAAAACCAA | GGTGACAAGCTGGAAATCTAAGCTTCA |
14 | ER-α |  | ss12568605 | G-A | Intron 6 | 0.119 | GGAACGGCCCTTGGAAATTGTAAA | CTGCCTACAGAATACAGTCAGCCA |
15 | ER-α |  | ss12568617 | G-A | Exon 8 | 0.203 | TCGCATTCCTTGCAAAAGTATTACATCAC | CAAGCAAATGAATGGCCACTCATCTAGAAA |
16 | IL-6 | Â | ss12568616 | C-G | 5' UTR | 0.434 | GGGCAGAATGAGCCTCAGACATC | GACATGCCAAAGTGCTGAGTCACTAATA |
17 | IL-6 | Â | ss12568586 | A-T | Exon 4 | 0.005 | CCTCCACTGCAAAGGATTTATTCAACA | CATGTCCTGCAGCCACTGGTTC |
18 | LEPR | Â | ss12568615 | A-G | Exon 4 | 0.290 | AGATTTAAGTTGTCTTGCATGCCACC | TTAAGCCCAGCATCCATTAGCTATTCTTTC |
19 | LEPR | Â | ss12568604 | G-C | Exon 14 | 0.182 | GAGTAATTGGAGCAATCCAGCCTACA | GCTTCAGCCACTGTACATCTTAGCTC |
20 | LEPR | Â | ss12568614 | G-A | Exon 20 | 0.353 | GCCACGCTGATCAGCAACTC | CCCTTGACTTGTCAGTCAAAAGCAC |
21 | PTHR1 | Â | ss12568589 | G-A | Intron 1 | 0.001 | GACTTACATTAGGATTCAAGGTTACTGCCA | GGGACGCAAGCCTGAGTCC |
22 | PTHR1 | Â | ss12568592 | A-G | Intron 2 | 0.398 | GCAGAACCCTAAGGGCTTGTCA | GGCGGGACCCAGGATACA |
23 | PTHR1 | Â | ss12568591 | C-T | Intron 8 | 0.374 | CGAGCCTCAATTCAGGTGAATCTAACC | CCCGCCCCAAGTGGAACA |
24 | PTHR1 | Â | ss12568588 | G-A | Intron 10 | 0.397 | CCTTGAGCCCTTGGTTTTCCTTTC | GCTCCGGGAACAAAAAGTGGATCA |
25 | PTHR1 | Â | ss12568590 | G-A | Exon 13 | 0.380 | CTACAAGGCTCAAATTGCCCCAAA | TTGGCGTCCACTACATTGTCTTCA |
26 | TGF-β1 |  | ss12568613 | C-T | 5' UTR | 0.311 | GGGCCCAGTTTCCCTATCTGTAAA | CTGGGCCACCGTCCTCATC |
27 | TGF-β1 |  | ss12568603 | +C/-C | Intron 4 | 0.021 | CCACGCCCCACTTATCTATCCC | GGAAAGGCCGGTTCATGCCA |
28 | TGF-β1 |  | ss12568593 | C-T | Exon 5 | 0.008 | CAGGCTACAAGGCTCACCTGAA | GGTTCACTACCGGCCGC |
29 | TGF-β1 |  | ss12568602 | C-T | Intron 5 | 0.274 | GGCTTGTCTTAAGCATTGCGTGAAATTAA | GTACAGCTGCCGCACGC |
30 | TNFR2 | Â | ss12568594 | T-C | 5' UTR | 0.000 | TGCACTCGGCCTGTTTAGACTC | CTGTTCATCTGCCCCCTGCC |
31 | TNFR2 | Â | ss12568611 | T-G | Exon 6 | 0.198 | AGCCACCCCAGCCACTC | GCTTGGAGCAGTGCTGGGTTC |
32 | UCP3 | Â | ss12568601 | C-T | 5' UTR | 0.265 | CACTGCCCTCACCAGCCA | GTGAGTCCTGCCACGGCA |
33 | UCP3 | Â | ss12568600 | G-A | Exon 2 | 0.000 | GCCCTAAAGGGACTGGGCA | GAAAGGTAACGAGGTCAGCAAAACA |
34 | UCP3 | Â | ss12568595 | T-C | Exon 3 | 0.258 | TGATTCCCGTAACATCTGGACTTTCATC | CTGCCTAAATCCCCTTAGCAGAAAAAAAAA |
35 | UCP3 | Â | ss12568580 | T-C | Exon 5 | 0.447 | CCTAACAGGAACTTTGCCCAACATCA | TCCACGGAGTTCTGGGTTCC |
36 | UCP3 | Â | ss12568599 | C-T | Exon 7 | 0.000 | CCTAACAGGAACTTTGCCCAACATCA | TCCACGGAGTTCTGGGTTCC |
37 | VDR | Â | ss12568583 | G-A | 5' UTR | 0.281 | CAGCATGCCTGTCCTCAGC | CCAGTACTGCCAGCTCCCA |
38 | VDR | Fok I | ss12568581 | C-T | Exon 2 | 0.373 | TGGCCCTGGCACTGACTC | GGCACGTTCCGGTCAAAGTC |
39 | VDR | Â | ss12568582 | C-T | Exon 4 | 0.000 | GGACAGTCTGCGGCCCA | CCCTACTCCCTGGGCCC |
40 | VDR | Bsm I | ss12568610 | G-A | Intron 8 | 0.419 | GTGCCCCTCACTGCCCTTA | CCTCAAATAACAGGAATGTTGAGCCCA |
41 | VDR | Taq I | ss12568608 | T-C | Exon 9 | 0.408 | GGGCCAGGCAGTGGTATCAC | AGGTCGGCTAGCTTCTGGATCA |