From: Screening large-scale association study data: exploiting interactions using random forests
 | Risk SNPs |  |  |  |  |  | Case Genotype Correlation | ||
---|---|---|---|---|---|---|---|---|---|
 |  | Allele | Marginal GRR | Penetrance Factors | Within System | Between System | |||
Model | Number | Frequency | Het | Hom | 0 | 1 | 2 | Â | Â |
H2M2 | 4 | 0.207 | 2.85 | 4.71 | 2.4E-02 | 0.51 | 1 | 0.30 | -0.32 |
H4M2 | 8 | 0.160 | 1.99 | 2.96 | 3.9E-04 | 0.50 | 1 | 0.35 | -0.12 |
H8M2 | 16 | 0.104 | 1.66 | 2.18 | 8.0E-06 | 0.56 | 1 | 0.32 | -0.05 |
H16M2 | 32 | 0.069 | 1.46 | 1.78 | 1.4E-05 | 0.59 | 1 | 0.28 | -0.02 |
H4M4 | 16 | 0.282 | 1.63 | 1.79 | 1.2E-08 | 0.79 | 1 | 0.17 | -0.06 |
H8M4 | 32 | 0.214 | 1.34 | 1.40 | 2.8E-03 | 0.86 | 1 | 0.14 | -0.02 |