Table 1 Linkage disequilibrium across 50 replicates.
From: A cautionary note on the appropriateness of using a linkage resource for an association study
Genes | |||||
|---|---|---|---|---|---|
b13 | b14 | b16 | b22 | b18 | |
Contribution to HDL trait | 0.1 | 0.05 | 0.02 | 0.01 | 0.005 |
Average marker resolution | 5.52 | 14.33 | 7.14 | 3.30 | 5.45 |
No. reps with LD (p < 0.05) | 8 | 2 | 8 | 24 | 5 |
No. reps with LD (0.05 <p < 0.1) | 6 | 2 | 6 | 13 | 2 |
No. reps with LD (0.1 <p < 0.2) | 19 | 4 | 7 | 5 | 5 |
No. reps 'without' LD (p > 0.5) | 3 | 32 | 6 | 0 | 21 |