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Table 1 Genome placement, traits affected, and allele frequencies for all model trait loci

From: Genetic Analysis Workshop 13: Simulated longitudinal data on families for a system of oligogenic traits

Locus Name   Haldane Map Position (cM)   Allele Frequencies
  Chrom. Male Female Sex Ave Trait(s) affected A B C D
Gb1 5 63.07 104.37 80.41 HT 0.40 0.30 0.30  
Gb2 7 128.43 248.54 184.89 HT 0.70 0.30   
Gb3 13 95.89 145.21 120.10 HT 0.50 0.50   
Gb4 13 39.71 41.89 41.75 HT 0.85 0.15   
Gb5 9 131.04 214.88 169.62 HT 0.70 0.30   
Gb6 7 27.20 31.23 28.69 HT 0.90 0.10   
Gb7 5 118.23 207.92 157.98 HT 0.50 0.30 0.20  
Gb8 21 4.47 33.95 18.25 HT 0.20 0.80   
Gb9 9 38.69 24.72 30.50 HT 0.50 0.50   
Gb10 7 92.04 159.96 123.53 HT 0.50 0.30 0.20  
Gb11 13 57.29 83.34 70.53 WT 0.40 0.30 0.20 0.10
Gb12 9 18.12 4.66 10.83 HDL, TG, GLUC 0.65 0.35   
Gb13 9 65.43 105.28 82.76 HDL, TG, GLUC 0.50 0.30 0.10 0.10
Gb14 1 199.01 398.38 293.26 HDL, TG, GLUC 0.75 0.25   
Gb15 21 34.93 66.97 49.65 HDL, TG, GLUC 0.45 0.35 0.20  
Gb16 3 88.06 120.35 102.17 HDL, TG, GLUC 0.50 0.40 0.10  
Gb17 1 63.06 143.18 100.73 HDL, TG, GLUC 0.40 0.30 0.30  
Gb18 17 57.79 81.79 67.77 HDL, TG, GLUC 0.60 0.30 0.10  
Gb19 17 44.99 18.83 31.14 HDL, TG, GLUC 0.70 0.20 0.10  
Gb20 17 49.99 27.83 38.14 HDL 0.30 0.40 0.30  
Gb21 11 47.00 42.93 45.14 HDL 0.80 0.20   
Gb22 5 8.64 2.20 5.33 HDL 0.20 0.40 0.40  
Gb23 19 107.83 128.20 114.52 TG 0.85 0.15   
Gb24 15 50.70 37.69 43.84 TG 0.90 0.10   
Gb25 1 108.85 218.67 160.75 TG 0.20 0.55 0.25  
Gb26 7 15.77 5.57 10.35 GLUC 0.70 0.20 0.10  
Gb27 3 48.64 36.61 41.84 GLUC 0.80 0.20   
Gb28 3 144.79 222.50 180.81 GLUC 0.25 0.25 0.50  
Gb29 17 55.98 73.57 62.89 GLUC 0.55 0.45   
Gb30 11 60.03 73.31 66.19 CHOL 0.45 0.35 0.20  
Gb31 1 114.67 238.40 172.93 CHOL 0.15 0.25 0.60  
Gb32 15 107.90 146.91 124.76 CHOL 0.50 0.45 0.05  
Gb33 3 49.10 43.87 45.53 CHOL 0.50 0.40 0.10  
Gb34 5 126.71 237.14 176.08 SBP 0.70 0.30   
Gb35 13 65.67 104.81 85.16 SBP 0.50 0.50   
Gb36 7 44.79 51.35 47.49 SBP 0.80 0.20   
Gb37 21 10.68 49.64 29.13 DBP 0.85 0.15   
Gb38 7 6.53 1.02 3.64 DBP 0.90 0.10   
Gs1 11 43.06 39.41 41.44 WT 0.75 0.25   
Gs2 7 58.03 68.69 62.69 WT 0.15 0.70 0.15  
Gs3 5 13.75 3.45 8.46 TG, GLUC 0.40 0.45 0.15  
Gs4 9 53.45 66.06 58.02 TG, GLUC 0.30 0.30 0.40  
Gs5 7 97.27 169.70 130.84 TG, GLUC 0.70 0.15 0.15  
Gs6 21 2.26 17.52 9.04 TG, GLUC 0.60 0.30 0.10  
Gs7 7 106.64 190.62 145.89 CHOL 0.60 0.30 0.10  
Gs8 15 63.90 87.03 74.29 CHOL 0.40 0.30 0.30  
Gs9 21 1.34 3.45 1.92 CHOL (FEMALE) 0.50 0.40 0.10  
Gs10 21 41.26 68.75 53.59 SBP, DBP 0.70 0.30   
Gs11 15 9.52 0.00 4.49 SBP, DBP 0.75 0.25   
Gs12 21 10.95 50.03 29.46 SBP, DBP 0.80 0.20