Quantitative trait loci in Anopheles gambiae controlling the encapsulation response against Plasmodium cynomolgi Ceylon

Table 4 Probability of a QTL for P. cynomolgi Ceylon encapsulation on chromosome 2.

Locus	Genetic (Cytogenetic) Location	Maximum F statistic*	R ^2†	Average of Family Maximum F statistics ^‡	P ^§	P' ^§	Average of Family R²
H417	0.0 (2R, 7B)	4.19	0.0398	3.48	0.069	1.0	0.1602
H784b	2.1(2R, 7A – 10D)	2.23	0.0304	2.55	0.37	1.0	0.1639
H175	3.1 (2R, 8C)	6.93	0.0901	5.76	0.039	0.624	0.2347
H290	4.3 (2R, 8C)	0.32	0.0043	3.21	0.167	1.0	0.1733
H799	18.7 (2R, 9B)	3.30	0.0839	3.30	0.074	1.0	0.0839
3F11-C1	(2R, 9B)	11.74	0.1240	200.88	0.01	0.16	0.4640
H187	24.7 (2R, 11A)	6.56	0.0588	5.15	0.024	0.348	0.1755
H095	42.3 (2R,13B)	12.70	0.1313	287.99	0.001	0.016	0.4184
H135	47.3 (2R, 14D)	9.48	0.0721	258.33	0.000	0.000	0.3389
H770	50.1 (2R, 15D – 16A)	5.85	0.0542	3.06	0.071	1.0	0.1399
3B20-B1	(2L, 24B)	0.13	0.0011	3.14	0.171	1.0	0.1297
H772	52.9 (2L, 25D – 28D)	1.19	0.0097	2.06	0.219	1.0	0.0901
H603	54.7 (2L, 26D)	0.04	0.0004	3.35	0.132	1.0	0.1381
H819	55.1(2L, 25D – 28D)	2.61	0.0305	3.28	0.143	1.0	0.1572
H802	57.0 (2L, 26D)	1.52	0.0127	4.69	0.027	0.432	0.1606
R007	71.1 (2L, 26D)	1.26	0.0105	3.67	0.109	1.0	0.1578

Conventions are as for Table 3. Underlined markers H175 and H135 indicate maximum LOD scores for Pen1 and Pen3 respectively [14]. Cytogenetic map positions have been used to order loci on 2L where possible. Cytogenetic and genetic map positions are derived from [14, 44–46] and unpublished. Cytogenetic locations were further confirmed by comparison to the current scaffolds of the A. gambiae genome (GenBank accessions AAAB01000001–AAAB01008987). Where the precise location of a marker is not known, its cytogenetic location is shown as the range covered by the corresponding scaffold.

ISSN: 2730-6844