Table 1 Nucleic acid and polypeptide features of mouse genes of the central section of the investigated region on Chr11.
Gene | Protein | ||||||||
|---|---|---|---|---|---|---|---|---|---|
mouse gene / cDNA | Structure | % nucleotide identity | Size | % sequence identity | |||||
designation | function | cDNA length (bp) | genomic length (kb) | number of exons | human | other species | length (aa) | human | other species |
Ugp2 | phosphorylation of UDP-glucose, glycogen metabolism | 2017 AF424698 | 60 | 10 | 89% (NM_006759) | Bos taurus 89% (L14019) Sus scrofa 88% (X99312) | 508 | 92% (NP_006750) | Bos taurus 92% (AAA30801) Sus scrofa 92% (CAA67690) |
Peli1 | putative member of cytoplasmic signalling pathway (IRAK) | 3710 AF302503 | 14 | 6 | 85% (AF302505) | n.a. | 418 (AAG15391) | 99% (AAG15393) | Ciona intestinalis 68% (BAB00628.1) Drosophila m. 74% (AAC96298) |
Otx1 | homeoboxgene, transcription factor during brain development | 1068 AF424700 | 4 | 3 | 85% (XM_049268) | Rattus norvegicus 96% (NM_013109.1) | 355 (AAB27579.1) | 97% (P32242) | Rattus norvegicus 98% (NP_037241.1) Danio rerio 74% (BAA05158.1) |
Hcc8 | hepatocellular carcinoma antigen | 4328 AF424699 | ~ 64 | ≥ 22 | 90% (AF102177) | Rattus norvegicus 92% (AJ010392.2) | 977 | 90% (AAF37319) | Rattus norvegicus 92% (CAB96885.1) |
Mor2 | cytoplasmic malate dehydrogenase | 1288 (NM_008618) | 15 | 9 | 90% (XM_002358) | Rattus norvegicus 94% (AF093773) Sus scrofa 87% (SSU44846) | 334 (NP_032644) | 97% (XP_002358) | Rattus norvegicus 98% (AAC64180.1) Sus scrofa 94% (AAC48610.1) |
Homoloc13 | unknown | 2151 AF424701 | ~ 150 | 11–12 | 84% (NM_015910) | n.a. | 643 | 80% (NP_056994) | n.a. |
Kiaa0903 | unknown, contains actinin binding domain, CAAX box | 4820 AF4246987 | ~ 350 | 25 | 88 % (AX030068) | n.a. | 1207 | 77% (BAA74926.1) | n.a. |
Homoloc2 | unknown | 3045 | >3 | n.a. | 85% (AA305160) | n.a. | no ORF | n.a. | n.a. |