Analysis of the leaf methylomes of parents and their hybrids provides new insight into hybrid vigor in Populus deltoides

Table 5 Annotations of hypermethylated genes

Gene ID	Located scaffold	Start position of the gene in the scaffold	End position of the gene in the scaffold	Length /bp	Annotation
POPTR_0010s02290	scaffold_10	2630875	2632874	2000	Predicted GTP-binding protein (ODN superfamily)
POPTR_0010s19920	scaffold_10	17678728	17680727	2000	Predicted 3-ketosphinganine reductase
POPTR_0007s08200	scaffold_7	6768492	6770491	2000	Ubiquitin-like protein
POPTR_0019s08620	scaffold_19	10148682	10150681	2000	Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
POPTR_0009s10580	scaffold_9	9068290	9070289	2000	15-hydroxyprostaglandin dehydrogenase and related dehydrogenases
POPTR_0012s07360	scaffold_12	8260585	8262584	2000	Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
POPTR_0015s09720	scaffold_15	10859015	10861014	2000	Cytochrome P450 CYP2 subfamily
POPTR_0019s02490	scaffold_19	2267881	2269880	2000	Serine/threonine protein kinase
POPTR_0019s09910	scaffold_19	11534694	11536693	2000	Molybdopterin converting factor, small subunit
POPTR_0008s18420	scaffold_8	12397080	12398840	1761	Leucine-rich repeat protein
POPTR_0017s04200	scaffold_17	3227408	3228528	535	Serine/threonine protein kinase
POPTR_0019s09760	scaffold_19	11360305	11360904	600	Apoptotic ATPase

The annotation of the hypermethylated genes in better-parent hybrids compared to the parents and lower-parent hybrids. These annotations were obtained according to orthologous genes in P. trichocarpa. Additional files

ISSN: 2730-6844