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Table 4 Nucleotide variation within the PtoSAHH family in Populus tomentosa natural populations from three climatic regions

From: Allelic variation within the S-adenosyl-L-homocysteine hydrolase gene family is associated with wood properties in Chinese white poplar (Populus tomentosa)

Locus

Climatic regions

N

S

Ï€ tot

Ï€ sil

Ï€ s

Ï€ n

Ï€n/Ï€s

Tajima's D*

Fu and Li's D*

PtoSAHHA

Northeastern region

14

82

0.01037

0.01721

0.02315

0.00236

0.10194

-0.05743

-0.97162

 

Southern region

15

91

0.01073

0.01767

0.02229

0.00262

0.11754

-0.29863

-1.07951

 

Northwestern region

14

83

0.00947

0.01583

0.02194

0.00202

0.09207

-0.43050

-1.03371

 

Total

43

166

0.01058

0.01763

0.02419

0.00233

0.09632

-1.20660

-4.15376*

PtoSAHHB

Northeastern region

14

74

0.00961

0.01504

0.01580

0.00324

0.20506

0.01985

-0.66621

 

Southern region

15

87

0.00959

0.01485

0.01400

0.00339

0.24214

-0.56229

-1.56176

 

Northwestern region

14

68

0.00922

0.01429

0.01316

0.00325

0.24696

0.21416

-0.65261

 

Total

43

160

0.00930

0.01444

0.01404

0.00326

0.23219

-1.42774

-3.95020*

  1. N = Number of sequences sampled; S = number of segregating sites; πtot = average nucleotide diversity in the full-length gene; πsil = average nucleotide diversity in synonymous and noncoding sites, πs = average nucleotide diversity of synonymous mutations; πn = average nucleotide diversity of nonsynonymous mutations; *P <0.05.