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Table 2 Significantly differentiated regions

From: Characterizing the genetic differences between two distinct migrant groups from Indo-European and Dravidian speaking populations in India

Discovery mechanism

Chr

Start (Mb)

End (Mb)

FST (window size)

XP-EHH (directiona)

iHS (INS)

iHS (GIH)

Genes

F ST

4

17.0

17.5

Top 0.1% (500 kb)

No evidence

No evidence

Top 1%

QDPR, FAM184B, CLRN2, DCAF16, LAP3, MED28

 

5

105.4

105.7

Top 0.1% (100 kb)

Top 0.5% (negative)

No evidence

No evidence

-

 

8

85.0

85.6

Top 0.1% (500 kb)

Top 0.5% (negative)

No evidence

No evidence

RALYL

 

15

45.7

46.2

Top 0.1% (500 kb)

Top 0.5% (negative)

No evidence

No evidence

SLC24A5, MYEF2, CTXN2, SLC12A1

 

17

41.3

41.5

Top 0.1% (100 kb)

Top 0.5% (positive)

No evidence

No evidence

MAPT, STH, KIAA1267

iHS

12

23.0

23.3

Top 1% (100 kb)

No evidence

No evidence

Top 0.1%

-

 

12

58.3

58.6

No evidence

Top 0.5% (negative)

No evidence

Top 0.1%

SLC16A7

 

12

80.3

80.6

Top 1% (100 kb)

No evidence

Top 0.1%

No evidence

ACSS3, PPFIA2

  1. Regions identified and validated across the genome by different discovery mechanisms using three population genetics metrics calculated from the data for GIH and INS.
  2. aPositive direction indicates evidence of positive selection in INS while negative direction indicates evidence of positive selection in GIH.