F
ST
Region with an over-representation of SNPs possessing high FST values relative to the genome-wide distribution of FST scores
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Regional evidence in the top 0.1% of the genome-wide distribution, in which:
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Discovered region should contain evidence found in the top 1% of the genome-wide distribution
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- Regions are defined by window sizes of 100 kb and 500 kb;
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- Evidence is defined by the P-value of the exact Binomial test for the proportion of SNPs with FST in the top 1st percentile (100 kb) or 0.1st percentile (500 kb) respectively of the genome-wide distribution score
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Differential iHS signals for GIH and INS
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At least one SNP with normalized iHS score in the top 0.19% of the genome-wide distribution in one population, but not present in the top 1% of the genome-wide distribution in the other population
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At least one SNP in the discovered region should have an iHS score in the top 1% of the genome-wide distribution, but absent in the top 1% of genome-wide distribution of iHS scores in the second population
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XP-EHH between GIH and INS
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Normalized XP-EHH scores should lie in the top 0.01% of the genome-wide distribution
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At least one SNP in the discovered region should lie in the top 0.5% of the genome-wide distribution of the normalized XP-EHH scores
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