Table 2 List of genes surveyed and primer sequences used in the study
Gene name | Primer name | Primer sequence (5′ - 3′) | Functional association |
|---|---|---|---|
Waxy [24] | WxU1F | GCCGAGGGACCTAATCTGC | Granule-bound starch synthase |
Wx1R | TGGTGTGGGTGGCTATTTGTAG | Â | |
Wx2FaF | GCCCCGCATGTCATCGTC | Â | |
Wx2R | GTTGTCTAGCTGTTGCTGTGGA | Â | |
Wx1Fint | TTGTCAGCACGTACAAGCA | Â | |
Wx2Rint | GCTATATACATTTTCCTTTGACCAA | Â | |
OsC1[27] | OsC1F1 | ATCGCTCAGTCTCACACCGCA | Anthocyanin biosynthesis |
OsC1F3 | GAGGGA GAATGGGGAGGAGAGC | Â | |
OsCF4 | TAATTGTGATCTGTATGGATGCTG | Â | |
OsC1F5 | GATCGATCGTGTATATATGTTGTCAGGT | Â | |
OsC1R6 | GTTGCTGTGTCGGTGT CGGCG | Â | |
OsC1R7 | ATGGCCGTCTCCTAATTCCCCTGC | Â | |
OsC1R2 | CGTACGGACGACGAACTAATGTCAC | Â |