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Table 2 Top 40 variations associated with patellar luxation derived from DNA sequence data

From: Genome-wide survey indicates involvement of loci on canine chromosomes 7 and 31 in patellar luxation in flat-coated retrievers

CFA

Position

Alleles

Associated allele

Frequency cases

Frequency controls

Frequency difference

03

67172456

[A/G]

G

0.54

0.33

0.21

07

15554687

[G/A]

A

0.45

0.23

0.22

07

15995236

[T/C]

C

0.55

0.27

0.28

07

17387000

[A/G]

G

0.53

0.31

0.22

07

19204281

[C/G]

G

0.72

0.50

0.22

07

19301203

[T/C]

C

0.82

0.53

0.29

07

19865384

[A/G]

G

0.65

0.36

0.29

07

20790820

[T/C]

C

0.42

0.16

0.26

07

21406148

[C/T]

C

0.26

0.57

0.31

07

22035860

[A/G]

G

0.72

0.44

0.28

07

22172500

[G/A]

A

0.81

0.57

0.24

07

22173886

[G/A]

A

0.84

0.49

0.35

07

22420986

[C/A]

A

0.51

0.26

0.25

07

23548193

[A/G]

A

0.09

0.33

0.24

07

24673491

[G/T]

T

0.27

0.06

0.21

07

24704299

[C/T]

C

0.12

0.46

0.34

07

25534837

[G/A]

A

0.61

0.37

0.24

07

27238943

[G/A]

G

0.37

0.58

0.21

07

28291838

[C/T]

T

0.84

0.47

0.37

07

28294930

[T/C]

C

0.66

0.31

0.35

07

29308525

[C/T]

T

0.75

0.37

0.38

07

29526712

[G/T]

T

0.38

0.17

0.21

07

30605944

[C/T]

T

0.43

0.21

0.22

07

30605965

[G/T]

T

0.39

0.15

0.24

07

31235880

[T/C]

C

0.67

0.29

0.38

07

31855627

[T/C]

C

0.71

0.46

0.25

07

31856484

[T/C]

C

0.65

0.41

0.24

07

31859005

[T/A]

T

0.16

0.44

0.28

07

32013108

[A/G]

A

0.19

0.47

0.28

07

32149996

[T/C]

C

0.63

0.15

0.48

07

32161825

[G/A]

A

0.71

0.35

0.36

07

32162626

[T/C]

C

0.62

0.27

0.35

23

22621361

[G/A]

A

0.28

0.03

0.25

23

22687566

[G/A]

A

0.40

0.16

0.24

31

14341470

[G/A]

A

0.47

0.26

0.21

31

17088962

[G/T]

T

0.71

0.50

0.21

36

27757717

[C/A]

A

0.54

0.28

0.26

36

27770444

[C/T]

T

0.34

0.13

0.21

36

28095751

[A/T]

A

0.13

0.35

0.22

36

29133623

[T/C]

C

0.54

0.33

0.21