Figure 2

Effects of various properties on F _ST measures, iHS, XP-EHH and MFPH. Influence of sampling time, migration rate, selection strength and recombination rate in simulations with selection (G > 0) (red line) and simulations without selection (G = 0, blue line). Mean values were calculated on 5 kb-windows containing the variant at site 50,001 and averaged over 100 simulations. Unless variable along the x-axis, the default values for the parameters were: G = 150, ρ = 0.001, m = 1, θ = 0.001, t_m = 100, t_s = 50, N = 500. A to D: mean MFPH, E to H: mean F_ST for SNPs, I to L: mean F_ST for haplotypes, M to P: mean iHS (absolute value), Q to T: mean XP-EHH.