Comparative mapping of chalkiness components in rice using five populations across two environments

BMC Genomic Data

Table 2 QTL detected for chalkiness traits in population ZS97/H94

Traits^a	Chr^b	Interval	QTL	Hainan			Wuhan
Traits^a	Chr^b	Interval	QTL	LOD	Add^c	% Var^d	LOD	Add^c	% Var^d
CR
	5	RM574-MRG0089	qCR5-H+	15.9	17.99	29.7	21	23.92	49.3
	6	RM435-RM170( wx )	qCR6-H+	14.6	16.47	24.9	3	6.7	3.9
	12	MRG2483-RM20A	qCR12-H+				2.7	6.56	3.7
CA
	1	RM577-RM23	qCA1-H+				12.6	8.6	41.3
	6	RM170(wx)-RM589	qCA6-H+	4.9	4.96	11.3
	9	RM278-RM553	qCA9-H+	8	6.98	22.4
WCR
	8	RM310-RM126	qWCR8-H-				5.3	-5.97	17.2
WBR
	3	MRG2538-RM426	qWBR3-H-	2.3	-6.94	3.1
	5	MRG0089-RM289	qWBR5-H+	12.3	20.62	27	11.1	20.93	31.5
	8	RM210-RM483	qWBR8-H+	11.5	17.71	19.9	5.2	14.49	15.1
WCA
	8	RM483-RM339	qWCA8-H-				6	-6.43	10.9
	9	RM160-RM328	qWCA9-H+	8.4	9.07	21.6
WBA
	5	MRG0089-RM289	qWBA5-H+				4.3	4.04	8.4
	6	RM589-MX21 (wx)	qWBA6-H+	4.7	5.9	16.9
	12	RM20A-RM179	qWBA12-H+				9.8	6.68	22.9

^aCR, chalkiness rate; CA, chalkiness area; WCR, white core rate; WBR, white belly rate; WCA, white core area; WBA, white belly area.
^bChr, chromosome.
^cThe additive (Add) effects caused by QTL; the positive value indicates that the ZS97 allele increase the trait score, while the negative value indicates that the ZS97 allele decrease the trait score.
^dThe phenotypic variation (Var) explained by QTL.

ISSN: 2730-6844