A combination of two variants in PRKAG3is needed for a positive effect on meat quality in pigs

BMC Genomic Data

Table 1 Positions, alleles and minor allele frequencies of the identified SNPs in PRKAG3

Exon	Variation^a	SS number	RS number	Position on chromosome 15, bp^b	Alleles^c	Yorkshire	Landrace
	ASGA0070625		80816788	133677385	A/G	0.21	0.28
	g.-311A > G		196959880	133800456	G/A	0.19	0.13
	g.-221G > A		196952335	133800546	A/G	0.19	0.13
	g.-157C > G		196956394	133800610	G/C	0.20	0.26
	g.-58A > G		196959698	133800709	G/A	0.20	0.26
2	*K24E*	947848631		133801207	A/G	0.17	0.20
3	T30N		328566929	133802071	A/C	0.01	0.13
3	*I41V*	947848632		133802103	A/G	0.20	0.16
3	G52S		343733804	133802136	A/G	0.43	0.12
4	L53P		337462352	133802499	T/C	0	0
4	*K131R*	947848633		133802733	G/A	0.19	0.15
4	*P134L*	947848634		133802742	T/C	0.19	0.16
5	I199V			133803828	A/G	0.45	0.30
5	R200Q			133803829	A/G	0	0

^aThe novel amino acid substitutions are given in italics with corresponding dbSNP submission numbers (http://www.ncbi.nlm.nih.gov/SNP/).
^bBased on Sus Scrofa build 10.2.
^cThe minor allele is given first.

ISSN: 2730-6844