Table 2 The significant SNPs associated with residual feed intake 1 (RFI1)
SNP | SSC1 | Position | p-value | MAF2 | Var.Exp3 | Nearest gene | Gene name |
|---|---|---|---|---|---|---|---|
MARC0013869 | 0 | 0 | 5.13 × 10-7 | 0.47 | 0.21 |  |  |
MARC0112693 | 1 | 30734120 | 1.52 × 10-6 | 0.44 | 0.19 | PEX7 | PEX7 peroxisomal biogenesis factor 7 |
H3GA0001223 | 1 | 30,769,583 | 1.41 × 10-6 | 0.44 | 0.19 | PEX7 | PEX7 peroxisomal biogenesis factor 7 |
ASGA0082396 | 1 | 30,941,797 | 3.73 × 10-7 | 0.45 | 0.20 | MAP3K5 | mitogen-activated protein kinase kinase kinase 5 |
ALGA0106992 | 1 | 30,962,276 | 3.13 × 10-7 | 0.45 | 0.20 | MAP3K5 | mitogen-activated protein kinase kinase kinase 5 |
ASGA0094502 | 1 | 30,978,281 | 3.73 × 10-7 | 0.45 | 0.20 | MAP3K5 | mitogen-activated protein kinase kinase kinase 5 |
ALGA0107451 | 1 | 31,008,523 | 3.07 × 10-7 | 0.45 | 0.20 | MAP3K5 | mitogen-activated protein kinase kinase kinase 5 |
H3GA0001228 | 1 | 31,202,546 | 1.89 × 10-7 | 0.44 | 0.21 | MAP3K5 | mitogen-activated protein kinase kinase kinase 5 |
ALGA0003540 | 1 | 60,869,380 | 5.44 × 10-7 | 0.15 | 0.15 | NT5E | 5'-nucleotidase, ecto |
ALGA0003690 | 1 | 64,094,344 | 4.04 × 10-7 | 0.26 | 0.18 | GABRR2 | gamma-aminobutyric acid (GABA) A receptor, rho 2 |
ALGA0108119 | 9 | 120,773,379 | 5.10 × 10-7 | 0.47 | 0.21 | ENSSSCG00000022338 | Uncharacterized protein |
ALGA0054579 | 9 | 120,972,491 | 3.86 × 10-7 | 0.47 | 0.21 | ENSSSCG00000022338 | Uncharacterized protein |
DRGA0009690 | 9 | 121,359,360 | 9.48 × 10-7 | 0.47 | 0.20 | ENSSSCG00000022338 | Uncharacterized protein |
H3GA0028049 | 9 | 121,407,081 | 7.61 × 10-7 | 0.48 | 0.20 | ENSSSCG00000022338 | Uncharacterized protein |
H3GA0038097 | 13 | 21,3691,291 | 1.29 × 10-6 | 0.12 | 0.13 | DSCAM | Down syndrome cell adhesion molecule |