No. of SNPs selected
|
|
|
|
|
---|
100
|
10.68 (280.4) ± 0.55
|
0.93 (11.3) ± 0.38
|
11.62 (95.9) ± 112.9
|
0.08 ± 0.03
|
200
|
10.81 (283.9) ± 0.57
|
0.72 (8.7) ± 0.35
|
11.54 (95.3) ± 107.7
|
0.06 ± 0.03
|
500
|
9.27 (243.4) ± 0.55
|
2.35 (28.3) ± 0.55
|
11.63 (96.0) ± 109.3
|
0.29 ± 0.04
|
1,000
|
8.01 (210.4) ± 0.57
|
3.80 (45.7) ± 0.73
|
11.81 (97.5) ± 111.3
|
0.32 ± 0.05
|
2,000
|
6.64 (174.2) ± 0.57
|
5.18 (62.4) ± 0.82
|
11.82 (97.6) ± 110.6
|
0.44 ± 0.05
|
4,000
|
5.40 (141.8) ± 0.59
|
6.49 (78.2) ± 0.92
|
11.89 (98.2) ± 114.7
|
0.54 ± 0.06
|
6,000
|
4.85 (127.2) ± 0.60
|
7.07 (85.2) ± 0.97
|
11.92 (98.4) ± 111.2
|
0.59 ± 0.06
|
8,000
|
4.86 (127.7) ± 0.62
|
7.07 (85.1) ± 0.98
|
11.93 (98.5) ± 113.3
|
0.59 ± 0.06
|
10,000
|
4.36 (114.5) ± 0.63
|
7.65 (92.2) ± 1.03
|
12.01 (99.2) ± 113.5
|
0.63 ± 0.06
|
20,000
|
3.74 (98.1) ± 0.64
|
8.36 (100.7) ± 1.08
|
12.10 (99.9) ± 115.5
|
0.69 ± 0.06
|
30,000
|
3.77 (98.8) ± 0.66
|
8.37 (100.8) ± 1.10
|
12.13 (100.2) ± 114.3
|
0.69 ± 0.06
|
38,502
|
3.81 (100) ± 0.66
|
8.30 (100) ± 1.09
|
12.11 (100) ± 113.7
|
0.69 ± 0.06
|
Imp1*2
|
4.11 (107.9) ± 0.68
|
8.01 (96.6) ± 1.09
|
12.12 (100.1) ± 115.6
|
0.66 ± 0.06
|
Imp2*2
|
3.91 (102.7) ± 0.66
|
8.19 (98.7) ± 1.09
|
12.10 (99.9) ± 113.7
|
0.67 ± 0.06
|
- *1Values in parentheses represent the percentage relative to the estimate obtained with model 1 incorporating the G matrix constructed using all available SNPs.
- *2Imp1 and imp2: 38,502 SNP genotypes imputed from 4,000 and 10,000 SNPs, respectively.