Table 6 The pathways for 14 genes containing significant SNPs for one feed efficiency trait
From: Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle
Pathway | Genes |
|---|---|
bta04010: MAPK signalling pathway | 282032 (RASA1), 282411 (CACNA1G), 533815 (STK3) |
bta01100: Metabolic pathways | 280951 (TYR), 532545 (GALNT13), 540113 (ATP6V1E2) |
bta04930: Type II diabetes mellitus | 282411 (CACNA1G), 538996 (ABCC8) |
bta04145: Phagosome | 512287 (LOC512287), 540113 (ATP6V1E2) |
bta02010: ABC transporters | 536203 (ABCG2), 538996 (ABCC8) |
bta04976: Bile secretion | 536203 (ABCG2) |
bta03013: RNA transport | 616055 (CHADL) |
bta03022: Basal transcription factors | 509259 (GTF2F2) |
bta04962: Vasopressin-regulated water reabsorption | 512287 (LOC512287) |
bta05132: Salmonella infection | 512287 (LOC512287) |
bta04514: Cell adhesion molecules (CAMs) | 529759 (SDC1) |
bta04512: ECM-receptor interaction | 529759 (SDC1) |
bta05144: Malaria | 529759 (SDC1) |
bta04966: Collecting duct acid secretion | 540113 (ATP6V1E2) |
bta04721: Synaptic vesicle cycle | 540113 (ATP6V1E2) |
bta00190: Oxidative phosphorylation | 540113 (ATP6V1E2) |
bta05323: Rheumatoid arthritis | 540113 (ATP6V1E2) |
bta03420: Nucleotide excision repair | 509602 (ERCC5) |
bta04510: Focal adhesion | 281848 (IGF1R) |
bta04114: Oocyte meiosis, bta05214: Glioma | 281848 (IGF1R) |
bta05218: Melanoma, bta05200: Pathways in cancer | 281848 (IGF1R) |
bta04914: Progesterone-mediated oocyte maturation | 281848 (IGF1R) |
bta04520: Adherens junction | 281848 (IGF1R) |
bta04730: Long-term depression, | 281848 (IGF1R) |
bta04144: Endocytosis | 281848 (IGF1R) |
bta00740: Riboflavin metabolism | 280951 (TYR) |
bta04916: Melanogenesis | 280951 (TYR) |
bta00350: Tyrosine metabolism | 280951 (TYR) |
bta03015: mRNA surveillance pathway | 281712 (CPSF3) |
bta03008: Ribosome biogenesis in eukaryotes | 508697 (HEATR1) |
bta05010: Alzheimer’s disease | 534774 (BACE2) |
bta04360: Axon guidance | 282032 (RASA1) |
bta04740: Olfactory transduction | 281701 (CNGA3) |
bta00512: Mucin type O-Glycan biosynthesis | 532545 (GALNT13) |
bta05164: Influenza A | 100048947 (RNASEL) |
bta05160: Hepatitis C | 100048947 RNASEL |
bta04020: Calcium signalling pathway | 282411 (CACNA1G) |