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Table 2 Means for eggshell-quality traits among genotypes and the SNP contribution to phenotypic variance (CPV) of the single-nucleotide polymorphism

From: The sodium channel gene family is specifically expressed in hen uterus and associated with eggshell quality traits

Gene

SNP

Trait1

Genotype(number)/Mean(SD)2

CPV3(%)

SCNN1b

rs13532836

 

CC(214)

TC(69)

TT(53)

 
  

ESP

13.95(1.30)ab

13.81(1.35)b

14.05(1.18)a

NA

  

EW

55.58(3.88)ab

56.53(4.03)b

55.19(3.69)a

1.04

SCNN1b

rs13532838

 

CC(81)

TC(164)

TT(90)

 
  

ESP

13.84(1.45)b

14.08(1.30)a

13.89(1.04)ab

0. 28

  

ESS

2.96(0.60)b

3.07(0.59)ab

3.16(0.68)a

1.14

  

EST

0.31(0.02)b

0.32(0.02)ab

0.32(0.02)a

0.25

SCNN1b

rs14075350

EST

CC(151)

CT(158)

TT(28)

0.60

   

0.32(0.02)a

0.31(0.02)b

0.32(0.02)ab

 

SCNN1g

rs15009191

 

CC(232)

CT(91)

TT(13)

 
  

ESP

13.93(1.20)ab

14.09(1.47)a

13.65(1.16)b

NA

  

EST

0.32(0.02)a

0.31(0.02)b

0.31(0.02)b

3.24

SCNN1d

rs15181931

 

CC(179)

CA(126)

AA(31)

 
  

ESP

14.16(1.34)a

13.81(1.22)b

13.52(1.00)c

3.96

  

EW

55.36(3.91)a

55.78(3.74)ab

56.80(3.42)b

0.83

SCNN1d

rs14282978

 

CC(1)

CT(33)

TT(302)

 
  

ESP

13.99(0.00)ab

13.44(1.08)b

14.02(1.28)a

6.99

SCNN1d

rs15181934

 

CC(135)

TC(19)

TT(183)

 
  

ESP

13.83 (1.16)b

14.16(1.34)c

13.33(1.15)a

6.35

  1. 1EW = Egg Weight; ESP = Eggshell Percentage; ESS = Eggshell Strength.
  2. EST = Eggshell Thickness after correction; % indicates these traits relative to Egg Weight.
  3. 2Different superscript (a, b, c) in the same row means phenotypes are significantly different between different genotypes (P < 0.05).
  4. 3CPV = SNP contribution to phenotypic variance (%).