Genotype – environment correlations in corals from the Great Barrier Reef

BMC Genomic Data

Table 5 Summary of statistics for the SNP loci that show a significant correlation between allele frequency distribution and environmental category in P. damicornis (type α & β)

Gene	Environmental variable	P. damicornis (type α)		P. damicornis (type β)
Gene	Environmental variable	Coeff LR	p-value	Coeff LR	p-value
β-hexosaminidase	Temp	0.250	0.00025	0.121	0.396
β-hexosaminidase	Water clarity	0.114	0.213	0.190	0.0374
Elongation factor 1-α 2631	Temp	0.232	0.0025	0.376	0.0347
Elongation factor 1-α 2631	Water clarity	0.126	0.246	0.472	0.0003
Putative un-characterised protein 1.1	Temp	0.057	0.399	0.085	0.538
Putative un-characterised protein 1.1	Water clarity	0.594	5.60e-10	0.539	0.051

Coeff LR = regression coefficients of the logistic regressions, p-values derived from the Wald tests and considered significant when < 0.05.

ISSN: 2730-6844