Table 1 List of SNPs and contig information for the eight SNP loci that were included in the final analysis in P. damicornis (type β)
From: Genotype – environment correlations in corals from the Great Barrier Reef
Gene | SNP name | Codon pos | Putative role in stress response | Reciprocal contig from Taylor-Knowles et al.[[62]] |
|---|---|---|---|---|
Beta-hexosaminidase * | 171_CT_243 | 3 | Immunity response | bu_91849_c19034 |
Elongation factor 1-alpha (1841) * | 1841_GA_723 | 3 | Stress induced apoptosis | bu_91849_c14445 |
Elongation factor 1-alpha (2631) * | 2631_GA_1228 | 1 | Stress induced apoptosis | bu_91849_lrc55786 |
Putative un-characterised protein 1.1* | 24_CT_847 | Un-known | bu_91849_c40532 | |
Putative un-characterised protein1.2 | 24_CA_2390 | Un-known | bu_91849_c40532 | |
Putative un-characterized protein – mitochondrial | 269_GA_818 | Un-known | bu_91849_c2047 | |
Carbonic anhydrase | 1361-TC_426 | 3 | A catalyst for the conversion of carbon dioxide and water into bicarbonate and protons | bu_91849_c8064 |
40S ribosomal protein S3 * | 5662_AG_462 | 3 | bu_91849_lrc55459 |