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Table 1 Populations tested in the study

From: Maternal phylogenetic relationships and genetic variation among Arabian horse populations using whole mitochondrial DNA D-loop sequencing

Populations (abbreviation) n NHap HapD (SD) NPS π (SD) k
HVR1 W HVR1 W HVR1 W HVR1 W HVR1 W
Syrian (SY) 114 43 50 0.96(0.007) 0.97(0.007) 44 69 0.0196(0.0006) 0.0142(0.0004) 8.6 13.6
Saudi (SU2) 22 10 10 0.84(0.06) 0.84(0.06) 36 50 0.0192(0.0023) 0.0129(0.0015) 8.5 12.4
Iranian Arabian (KA) 10 8 8 0.96(0.06) 0.96 (0.06) 29 42 0.023(0.0019) 0.0153(0.0013) 10.2 14.6
USA-Egyptian(EG) 24 9 9 0.83(0.06) 0.83(0.06) 26 38 0.019(0.0018) 0.0128(0.0012) 8.5 12.1
USA-Egyptian & Saudi mix (SE) 10 4 5 0.79(0.09) 0.84(0.08) 19 26 0.0199(0.0027) 0.0126(0.0015) 8.8 12.1
USA-Saudi (SU1) 31 7 7 0.8(0.042) 0.8(0.042) 34 51 0.0223(0.0016) 0.015(0.001) 9.9 14.3
Shagya Arabian (SA) 9 8 8 0.97(0.06) 0.97(0.06) 30 41 0.0234(0.002) 0.0153(0.0018) 10.3 14.6
Polish Arabian (PA) 13 6 6 0.82(0.08) 0.82(0.08) 25 42 0.0213(0.002) 0.0163(0.0017) 9.4 15.6
Davenport (DV) 19 6 6 0.74(0.083) 0.74(0.083) 26 36 0.020(0.0023) 0.01281(0.0016) 8.9 12.2
Mongolian (MON) 5 5 5 1(0.12) 1(0.12) 19 28 0.0195(0.0038) 0.013(0.0027) 8.6 12.4
Caspian (CS) 14 9 9 0.93(0.045) 0.93(0.045) 35 54 0.023(0.0022) 0.017(0.0013 10.2 16.1
ALL 271 74 97 0.97(0.003) 0.98(0.002) 60 99 0.022(0.0005) 0.0152(0.0003) 9.7 14.5
  1. n number of individuals in each population. NHap the number of haplotypes resulted in each population. HapD Haplotype diversity with its standard deviation. NPS the number of polymorphic sites. π Nucleotide diversity with its standard deviation. k Average number of nucleotide differences. HVR1 part of the upstream D-loop (450 sites). W the whole D-loop (951 sites).