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Table 1 Genome-wide significant* SNPs for antibody response to the Newcastle disease virus

From: Genome-wide association study of antibody response to Newcastle disease virus in chicken

SNP ID GGA Position(bp) Nearest gene SNP FA FAW FAR FAS Pvalue R2
rs15354805 1 100399530 ROBO2 C/T C 0.756 0.750 1.000 3.90×10-7 0.05
rs15355555 1 100994585 243 Kb upstream of ROBO2 A/G G 0.758 0.750 1.000 8.15×10-7 0.04
  1. Note: ‘FA’=favorable allele with higher antibody response to the Newcastle disease virus, ‘FAW’= favorable allele frequency of the F2 population, ‘FAR’= favorable allele frequency of the fast-growing Chinese yellow broiler sire line, ‘FAS’= favorable allele frequency of the Huiyang beard chicken. *Significant at the 5% level by the Bonferroni correction.