Genome-wide association study of antibody response to Newcastle disease virus in chicken

BMC Genomic Data

Table 1 Genome-wide significant* SNPs for antibody response to the Newcastle disease virus

SNP ID	GGA	Position(bp)	Nearest gene	SNP	FA	FAW	FAR	FAS	Pvalue	R²
rs15354805	1	100399530	ROBO2	C/T	C	0.756	0.750	1.000	3.90×10^-7	0.05
rs15355555	1	100994585	243 Kb upstream of ROBO2	A/G	G	0.758	0.750	1.000	8.15×10^-7	0.04

Note: ‘FA’=favorable allele with higher antibody response to the Newcastle disease virus, ‘FAW’= favorable allele frequency of the F₂ population, ‘FAR’= favorable allele frequency of the fast-growing Chinese yellow broiler sire line, ‘FAS’= favorable allele frequency of the Huiyang beard chicken. *Significant at the 5% level by the Bonferroni correction.

ISSN: 2730-6844