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Table 3 Genetic diversity estimates at eight microsatellite loci across the grape phylloxera populations from four vineyard-sites in Napa (Oakville) and Yolo (Woodland) counties, California

From: Reproductive mode and fine-scale population genetic structure of grape phylloxera (Daktulosphaira vitifoliae) in a viticultural area in California

Population ID

Locus

N

Na

Ne

H O

H E

F IS

P(HWE)

Col-1

DVIT1

30

2.0

2.0

1.000

0.500

-1.000

*

 

DVIT2

30

3.0

2.3

0.633

0.572

-0.108

0.136

 

DVIT3

30

2.0

1.8

0.633

0.433

-0.463

*

 

DVSSR4

30

3.0

1.6

0.433

0.365

-0.187

*

 

DVSSR6

30

1.0

1.0

0.000

0.000

N/A

-

 

DVSSR7

30

2.0

1.3

0.233

0.206

-0.132

1.000

 

DVSSR16

30

1.0

1.0

0.000

0.000

N/A

-

 

DVSSR17

30

3.0

2.1

0.167

0.529

0.685

*

Col-2

DVIT1

35

5.0

2.6

0.800

0.619

-0.292

*

 

DVIT2

35

2.0

1.8

0.343

0.431

0.205

*

 

DVIT3

35

3.0

1.2

0.171

0.159

-0.080

1.000

 

DVSSR4

35

3.0

2.4

0.629

0.579

-0.085

1.000

 

DVSSR6

35

2.0

1.1

0.000

0.108

1.000

*

 

DVSSR7

35

2.0

1.1

0.000

0.056

1.000

*

 

DVSSR16

35

2.0

1.6

0.457

0.382

-0.197

0.402

 

DVSSR17

35

3.0

2.1

0.314

0.524

0.400

*

UCD-OKV

DVIT1

39

6.0

2.7

0.718

0.625

-0.149

*

 

DVIT2

39

3.0

2.2

0.385

0.536

0.283

*

 

DVIT3

39

2.0

1.1

0.103

0.097

-0.054

1.00

 

DVSSR4

39

3.0

2.9

0.744

0.651

-0.143

*

 

DVSSR6

39

3.0

1.4

0.051

0.308

0.833

*

 

DVSSR7

39

1.0

1.0

0.000

0.000

N/A

-

 

DVSSR16

39

2.0

1.9

0.282

0.467

0.396

*

 

DVSSR17

39

2.0

2.0

0.359

0.500

0.282

*

Woodland

DVIT1

21

4.0

2.7

0.714

0.625

-0.143

*

 

DVIT2

21

4.0

2.2

0.524

0.545

0.040

1.000

 

DVIT3

21

3.0

1.8

0.571

0.459

-0.244

*

 

DVSSR4

21

4.0

2.4

0.571

0.577

0.010

0.371

 

DVSSR6

21

2.0

1.0

0.048

0.046

-0.024

1.00

 

DVSSR7

21

1.0

1.0

0.000

0.000

N/A

-

 

DVSSR16

21

2.0

1.2

0.095

0.172

0.447

*

 

DVSSR17

21

3.0

2.1

0.476

0.516

0.077

0.530

  1. N, Number of samples; Na, Number of alleles; Ne, Number of effective alleles; HO, Observed heterozygosity; HE, Expected heterozygosity, FIS, Fixation index;*, P < 0.05 (significant).