From: Body composition and gene expression QTL mapping in mice reveals imprinting and interaction effects
 |  |  | Peak | Flanking markersc |  |  |  | Estimated |  |  |  |  |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Chr | Traita | Groups | (cM)b | Left | Right | F-value | LOD | a | s.ea | d | s.ed | % vare |
1 | Gastro** | pQTL | 23 | rs3696088 | rs13472794 | 35.40 | 14.84 | -0.0417 | 0.0054 | -0.0239 | 0.0073 | 6.73 |
1 | Pec** | pQTL | 23 | rs3696088 | rs13472794 | 53.84 | 22.19 | -0.0084 | 0.0089 | -0.0503 | 0.0120 | 9.88 |
1 | Tnni1 | eQTL | 23 | rs3696088 | rs13472794 | 8.73 | 3.75 | -0.3433 | 0.0965 | -0.2555 | 0.1282 | 2.23 |
1 | AI** | pQTL | 24 | rs3696088 | rs13472794 | 13.00 | 5.57 | 0.0813 | 0.0165 | 0.0332 | 0.0219 | 2.64 |
1 | Fat** | pQTL | 24 | rs3696088 | rs13472794 | 13.54 | 5.80 | 0.0817 | 0.0167 | 0.0367 | 0.0222 | 2.68 |
1 | Edl** | pQTL | 25 | rs3696088 | rs13472794 | 7.19 | 3.10 | -0.0327 | 0.0086 | 0.0010 | 0.0112 | 1.44 |
2 | Edl | pQTL | 78 | rs3144393 | rs13476878 | 6.79 | 2.93 | -0.0179 | 0.0052 | 0.0107 | 0.0082 | 1.36 |
2 | Gastro** | pQTL | 80 | rs3144393 | rs13476878 | 9.40 | 4.04 | -0.0117 | 0.0033 | 0.0124 | 0.0053 | 1.88 |
2 | AI** | pQTL | 88 | rs3144393 | rs13476878 | 18.65 | 7.95 | 0.0519 | 0.0091 | -0.0263 | 0.0138 | 3.65 |
2 | Fat** | pQTL | 88 | rs3144393 | rs13476878 | 19.62 | 8.35 | 0.0535 | 0.0092 | -0.0279 | 0.0140 | 3.84 |
3 | Pec | pQTL | 44 | rs13477174 | rs3670634 | 9.84 | 4.23 | 0.0143 | 0.0049 | 0.0243 | 0.0069 | 1.96 |
3 | Gastro | pQTL | 56 | rs3663873 | rs13477430 | 6.51 | 2.81 | 0.0084 | 0.0032 | 0.0134 | 0.0050 | 1.31 |
3 | Edl | pQTL | 64 | rs3663873 | rs13477430 | 5.45 | 2.35 | 0.0179 | 0.0058 | 0.0145 | 0.0103 | 1.10 |
4 | IGF1 | eQTL | 68 | rs6324470 | rs3659226 | 8.46 | 3.63 | 0.0985 | 0.0312 | -0.1273 | 0.0516 | 2.17 |
5 | Gastro | pQTL | 49 | rs6256504 | CEL-5_52953963 | 4.51 | 1.95 | -0.0050 | 0.0030 | 0.0113 | 0.0048 | 0.91 |
6 | Gastro | pQTL | 0 | - | rs13478602 | 6.64 | 2.86 | -0.0058 | 0.0028 | 0.0125 | 0.0041 | 1.33 |
6 | AI** | pQTL | 27 | rs13478727 | rs13478839 | 10.27 | 4.41 | 0.0393 | 0.0090 | -0.0121 | 0.0136 | 1.99 |
6 | Fat** | pQTL | 28 | rs13478727 | rs13478839 | 9.97 | 4.29 | 0.0394 | 0.0091 | -0.0122 | 0.0137 | 1.98 |
6 | lengthNT** | pQTL | 45 | rs3676254 | rs3656205 | 13.45 | 5.76 | 0.2921 | 0.0578 | 0.1200 | 0.0975 | 2.58 |
7 | Gastro | pQTL | 47 | rs3676254 | rs3656205 | 5.65 | 2.44 | 0.0227 | 0.0068 | -0.017 | 0.0073 | 1.14 |
7 | Pec** | pQTL | 47 | rs3676254 | rs3656205 | 10.54 | 4.53 | 0.0445 | 0.0113 | -0.0169 | 0.0122 | 2.10 |
8 | Gastro | pQTL | 37 | rs13479657 | rs13479757 | 7.22 | 3.11 | 0.0134 | 0.0036 | -0.0032 | 0.0060 | 1.45 |
8 | Fat** | pQTL | 68 | rs3678433 | rs6182338 | 15.00 | 6.42 | 0.0556 | 0.0102 | 0.0022 | 0.0163 | 2.96 |
8 | AI** | pQTL | 69 | rs3678433 | rs6182338 | 15.38 | 6.58 | 0.0546 | 0.0100 | 0.0032 | 0.016 | 2.95 |
9 | Gastro | pQTL | 0 | - | rs13480071 | 4.28 | 1.85 | -0.0039 | 0.0029 | -0.0100 | 0.0039 | 0.86 |
9 | AI | pQTL | 23 | rs8259427 | rs6213724 | 8.94 | 3.85 | 0.0311 | 0.0091 | 0.0334 | 0.0139 | 1.79 |
9 | Fat | pQTL | 23 | rs8259427 | rs6213724 | 9.18 | 3.95 | 0.0320 | 0.0091 | 0.0336 | 0.0140 | 1.83 |
10 | lengthNT | pQTL | 26 | rs13480578 | CEL-10_58149652 | 7.96 | 3.43 | 0.1970 | 0.0519 | -0.0946 | 0.0792 | 1.58 |
10 | Gastro | pQTL | 30 | rs13480579 | CEL-10_58149653 | 4.50 | 1.94 | -0.0082 | 0.0028 | -0.0033 | 0.0041 | 0.91 |
11 | Tail** | pQTL | 25 | rs6276300 | rs6199956 | 16.87 | 7.21 | 0.2461 | 0.0425 | 0.024 | 0.0682 | 3.29 |
11 | lengthNT** | pQTL | 26 | rs6276300 | rs6199956 | 21.55 | 9.16 | 0.3596 | 0.0556 | 0.0833 | 0.0892 | 4.15 |
11 | BMI | pQTL | 49 | rs13481054 | rs3701609 | 8.23 | 3.55 | 0.5312 | 0.1385 | 0.2684 | 0.1978 | 1.64 |
11 | Gastro | pQTL | 68 | rs3653651 | rs13481216 | 4.86 | 2.10 | 0.0086 | 0.0028 | 0.0026 | 0.0040 | 0.98 |
14 | Gastro | pQTL | 34 | rs8251329 | rs3712401 | 7.77 | 3.35 | 0.0118 | 0.0030 | 0.0030 | 0.0042 | 1.56 |
17 | AI** | pQTL | 17 | rs13482893 | rs3719497 | 11.2 | 4.81 | 0.0418 | 0.0091 | -0.0079 | 0.0145 | 2.14 |
17 | Fat** | pQTL | 17 | rs13482893 | rs3719497 | 10.94 | 4.70 | 0.0415 | 0.0091 | -0.0097 | 0.0144 | 2.14 |
17 | Edl** | pQTL | 33 | rs3023442 | rs6395919 | 7.74 | 3.34 | -0.0187 | 0.0049 | 0.0072 | 0.0079 | 1.55 |
17 | Gastro** | pQTL | 68 | rs6257479 | rs3663966 | 9.62 | 4.14 | -0.0128 | 0.0029 | 0.0024 | 0.0042 | 1.92 |
18 | lengthNT | pQTL | 34 | rs3670254 | rs3718618 | 8.39 | 3.62 | 0.2128 | 0.0522 | 0.0373 | 0.078 | 1.67 |
18 | lengthNA | pQTL | 35 | rs3670254 | rs3718618 | 8.62 | 3.72 | 0.1345 | 0.0325 | 0.0149 | 0.0486 | 1.71 |