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Table 4 GenBank accessions of novel nucleotide sequences

From: Pseudogenization of the MCP-2/CCL8 chemokine gene in European rabbit (genus Oryctolagus), but not in species of Cottontail rabbit (Sylvilagus) and Hare (Lepus)

Description

GenBank Name

GB Accession

Legr_CCL8_cDNA

CCL8_Legr2

JX000247

Leeu_CCL8_cDNA

CCL8_Leeu1

JX000248

Legr_CCL8_cDNA

CCL8_Legr6

JX000249

Leeu_CCL7_cDNA

CCL7_Leeu2

JX000250

Legr_CCL7_cDNA

CCL7_Legr6

JX000251

Occ_CCL7_cDNA

CCL7_Occ32

JX000252

Occ_CCL8_gDNA

CCL8gDNA_Occ_Tar109_1

JX000253

Occ_CCL8_gDNA

CCL8gDNA_Occ_Tar109_2

JX000254

Occ_CCL8_gDNA

CCL8gDNA_Occ_Alt104_1

JX000255

Occ_CCL8_gDNA

CCL8gDNA_Occ_Alt104_2

JX000256

Occ_CCL8_gDNA

CCL8gDNA_Occ_Tar102_1

JX000257

Occ_CCL8_gDNA

CCL8gDNA_Occ_Tar102_2

JX000258

Occ_CCL8_gDNA

CCL8gDNA_Occ_Zrg18_1

JX000259

Oca_CCL8_gDNA

CCL8gDNA_Occ_Zrg18_2

JX000260

Oca_CCL8_gDNA

CCL8gDNA_Oca_Pan3_1

JX000261

Oca_CCL8_gDNA

CCL8gDNA_Oca_Pan3_2

JX000262

Oca_CCL8_gDNA

CCL8gDNA_Oca_Ped1

JX000263

Oca_CCL8_gDNA

CCL8gDNA_Oca_Ped9_1

JX000264

Oca_CCL8_gDNA

CCL8gDNA_Oca_Ped9_2

JX000265

Oca_CCL8_gDNA

CCL8gDNA_Oca_Mert35_1

JX000266

Oca_CCL8_gDNA

CCL8gDNA_Oca_Mert35_2

JX000267

Oca_CCL8_gDNA

CCL8gDNA_Oca_Hue54

JX000268

Bumo_CCL8_gDNA

Bumo_CCL8

JX000276

Legr_CCL8_gDNA

Legr_CCL8

JX000277

Syfl_CCL8_gDNA

Syfl_CCL8_1

JX000279

Syfl_CCL8_gDNA

Syfl_CCL8_2

JX000280

Oca_CCL13_exon1_gDNA

Oca_Pan3x_CCL13ex1

JX020976

Oca_CCL13_exon1_gDNA

Oca_Pan3y_CCL13ex1

JX020977

Oca_CCL13_exon1_gDNA

Oca_Ped1_CCL13ex1

JX020978

Oca_CCL13_exon1_gDNA

Oca_Ped9_CCL13ex1

JX020979

Leti_CCL13_exon1_gDNA

Leti_2061_CCL13ex1

JX020980

Syfl_CCL13_exon1_gDNA

Syfl_161_CCL13ex1

JX020981

Syfl_CCL13_exon1_gDNA

Syfl_162_CCL13ex1

JX020982

Syfl_CCL13_exon1_gDNA

Syfl_171x_CCL13ex1

JX020983

Syfl_CCL13_exon1_gDNA

Syfl_171y_CCL13ex1

JX020984

Syfl_CCL13_exon1_gDNA

Syfl_176_CCL13ex1

JX020985

  1. Sequences were obtained by PCR using either genomic DNA (gDNA) or reverse transcribed mRNA (cDNA). Species names are indicated by abbreviations (Legr: Lepus granatensis; Leeu: Lepus europaeus; Leti: Lepus timidus; Bumo: Bunolagus monticularis; Syfl: Sylvilagus floridanus; Oc: Orytolagus cuniculus). The two subspecies of Oryctolagus cuniculus are distinguished (Occ: O. cuniculus cuniculus; Oca: O. cuniculus algirus). Extensions (x and y) refer to reproducible sequence ambiguities in PCR products obtained from a same individual that can be explained by allelic variation. Legr_CCL8 is a consensus sequence of Legr2016 and Legr2061; Syfl_CCL8_1 and _2 are two putative alleles inferred from sequences obtained with Syfl-161, -162, -171, -172, -176.
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BMC Genomic Data

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